| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3460 |
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| Symbol | |
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| ID | 4605707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4089221 |
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| End bp | 4090939 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639782880 |
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| Product | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase |
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| Protein accession | YP_929332 |
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| Protein GI | 119776592 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
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| TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCACT TGCATTCGAG TACTGCCGAA CTCAATTTGT TGTGGGGCTC TTTGATTCTG
GAGGAGCTCA CCCGCCACGG TGTAATGCAT CTGTGCATGG CACCGGGCTC CCGCTCGACG
CCACTGACTC TGGCGGCCGC CGCACAGGAT AAGCTGACCC GGCATCTGCA TTTTGATGAG
CGGGGGTTGG GGTTCCTTGC CCTCGGGTTG GCGAAAGCCA GCCAGGCCCC CGTCGCCATC
ATCACCACAT CGGGTACCGC CGTGGCCAAC CTGTATCCGG CCATAGTGGA AGCATCCCTC
ACCCACGTGC CCCTGATTAT TCTCTCCGGC GACAGACCCT GGGAACTGAT TGGCTGTGGC
GCCAATCAGG CCATTGAGCA GCTTGGTATT TTTGGCGGTT ACGCCCGCCA GCTCAATCTG
CCGACTCCCG ACCTGCGAAT TGGTCCGGAA GTGCTGCTCA GCGCCCTTGA TGAACAATTG
GCCAATCTCG ACCGGCCGCT GCATATCAAT TGCATGTACC CCGAGCCCCT GTATCCGTCA
GAACACAGGT TCGATCAGTT CGACAGTTAT TTGAGTCGTC TTGGCCAGTG GCAGGATACT
CAGGTGCCTT ATCTGTCGGT GGCCAATGCC AGCCTCAGCG CCTTCCCTCC CCGGGATGCC
ATGATGCGCT TTGTCCATGG CAAAGGGGTG ATAGTGGCGG GCACCCTGAC CGAAGCCGAA
ACTCCGACAG AACTCATTAC CTTGTCGCAA AAACTGGGTT GGCCACTGCT GACCGATGCT
CAAAGCCAGC TGCGCCAGCA TCCGGGGGCC ATAGGGCATA TCGATCAGCT GCTGCTCAAT
CCCAGGGCCC GCGCCCTGTT GGATCAGGCC GAACGGGTAC TGGTATTTGG CGGCCGACTC
CTGTCGAAAC GCCTAATCAG TTATCTGGCT GAAAAAGACT GGCACAGTTA CTGGCAGGTA
TTACCCCATC AGGAAAGACT CGACCCCAGC CACAGCAACA AGCAACTTTG GCTCGGCCGG
GCTGGTGATG TCTGCGCCCT GGAATGGCCA CGCTCATCCG AGGCCAACTG GGCGGCGTCG
CTTATCAGCC TGAATCAGTC AGTTGAGCAG GACTTTATCC ATCATATTGA TGGCGGCGAA
TTCGGTGAGG CTCAGGTTAT TCGCGCCATC GCCGCCAGCC ATACCGCCGA GCAGCAACTC
TTTATCGGTA ACAGCCTGCC GGTGCGCCTC TATGATATGT TTGCGCCCAT CGGCTGCTGC
GCCGCGTCTA CCTATACCAA CAGAGGTGCT TCCGGCATCG ATGGTCTTAT TGCCACCGCC
TGCGGTGTCG CCCGTCATAG CGGACGGCCC ACCACCCTGA TTCTCGGGGA TTTGTCTGCG
CTGCACGATT TGAACTCTCT GGCGCTCGCC CGGGATTGCC AGTCACCCCT GGTCATAGTT
GTGCTCAACA ATGATGGCGG CAATATTTTT AACTTGTTGC CGGTTCCCAC AGAAGAGCTT
CGCAGCGACT TCTATCGCCT CAGCCACGGG TTGGAATTTG GCTACGGCGC CGCCATGTTT
GGCCTGCCCT ACGACCGTGC CGAAGATATG GAGGCCTTTA TCGATGCCTA TCAGGCGGCC
CTGGAACATC CGGGCGCCTC TGTGATTGAA GTGACAGTGG CCCAGGATCA GGCCAGTAAT
CAGATAAGGA GAATGGCAGA GTGGATACGC AGCCGCTGA
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| Protein sequence | MDHLHSSTAE LNLLWGSLIL EELTRHGVMH LCMAPGSRST PLTLAAAAQD KLTRHLHFDE
RGLGFLALGL AKASQAPVAI ITTSGTAVAN LYPAIVEASL THVPLIILSG DRPWELIGCG
ANQAIEQLGI FGGYARQLNL PTPDLRIGPE VLLSALDEQL ANLDRPLHIN CMYPEPLYPS
EHRFDQFDSY LSRLGQWQDT QVPYLSVANA SLSAFPPRDA MMRFVHGKGV IVAGTLTEAE
TPTELITLSQ KLGWPLLTDA QSQLRQHPGA IGHIDQLLLN PRARALLDQA ERVLVFGGRL
LSKRLISYLA EKDWHSYWQV LPHQERLDPS HSNKQLWLGR AGDVCALEWP RSSEANWAAS
LISLNQSVEQ DFIHHIDGGE FGEAQVIRAI AASHTAEQQL FIGNSLPVRL YDMFAPIGCC
AASTYTNRGA SGIDGLIATA CGVARHSGRP TTLILGDLSA LHDLNSLALA RDCQSPLVIV
VLNNDGGNIF NLLPVPTEEL RSDFYRLSHG LEFGYGAAMF GLPYDRAEDM EAFIDAYQAA
LEHPGASVIE VTVAQDQASN QIRRMAEWIR SR
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