| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3440 |
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| Symbol | |
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| ID | 4605687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4072076 |
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| End bp | 4072552 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639782860 |
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| Product | RNA methyltransferase TrmH, group 2 |
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| Protein accession | YP_929312 |
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| Protein GI | 119776572 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
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| TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGCAT CCATGTTCCA CATCGCCCTC TATGAACCCG AAATCGCCCC CAACACGGGC
AACATTATTC GCCTGTGCGC CAACAATGGC TGCGAACTGC ACCTGATTGA ACCTTTGGGG
TTTGATTTAG AAGAGAAAAA GCTGCGCCGC GCCGGGCTGG ATTACAGCGA CATGACCCGG
GTAACCCGCC ATAAGGACTT CCCGAGCTTC CTTGAAGCCA TGGCGGGGCG GCGCATTCTG
GCCTGCACCA CCAAGGGCAG TCGGCCCCAT ACTGAGCTTG AGTATCAAGC AGGCGATGTA
CTGCTGTTTG GCCCCGAGAG CCGCGGCCTG CCAATGGACA TCATCAACTC GGTGCCCACC
GAGCAGCGGT TGCGTATTCC CATGGTGGAA TCGAGCCGCA GCCTAAACCT ATCCAACGCA
GTAGCCATTA TCAGCTACGA AGCCTGGCGT CAGCAGGGCT TTGGTGGTGC ACGTTAA
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| Protein sequence | MPASMFHIAL YEPEIAPNTG NIIRLCANNG CELHLIEPLG FDLEEKKLRR AGLDYSDMTR
VTRHKDFPSF LEAMAGRRIL ACTTKGSRPH TELEYQAGDV LLFGPESRGL PMDIINSVPT
EQRLRIPMVE SSRSLNLSNA VAIISYEAWR QQGFGGAR
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