| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3435 |
|---|
| Symbol | |
|---|
| ID | 4605682 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 4065948 |
|---|
| End bp | 4067468 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639782855 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_929307 |
|---|
| Protein GI | 119776567 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.256643 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTACA GCGCTCCGGG CACAGCGGGT GCCATCGCTT CATTCAAGGC CAGATACGAC
AACTTTATTG GCGGCAAGTG GGTGCCCCCC GTGGGTGGCG AGTACTTTGA TAACGTCTCG
CCTGTGGATG GCAAGGTGTT TTGTCAGGCG GCCCGCTCTG ACTATCGCGA CATCGAGCTC
GCCCTCGATG CCGCCCATGC CGCCAAAGAC AGCTGGGGCA AAACCTCGGT AACCGAGCGC
AGCAATCTGC TTTTGAAAAT TGCCGATAGG GTCGAGCAGC ATCTCGAACG TCTCGCCGTG
GTGGAAACCT GGGAAAACGG CAAAGCGGTG CGCGAGACCC TGAACGCCGA CCTGCCTTTA
TTTGTTGACC ACTTCCGTTA TTTCGCCGGT TGTATCCGCG CCCAGGAAGG CAGCGCGGCA
GACCTTGATG CTAATACCGT GAGCTACCAC CTCCCTGAGC CTTTGGGCGT GGTCGGGCAA
ATTATCCCCT GGAACTTCCC CCTGCTGATG GCGGCCTGGA AAATCGCCCC GGCGCTGGCG
GCGGGTAACT GTGTAGTGCT CAAGCCTGCC GAGCAAACAC CGGCCTCCAT CATGGTGCTT
TTGGAGACTA TCGAAGATCT GCTGCCCCCC GGCGTACTCA ATGTGGTTAA TGGTTTTGGC
GCCGAAGCCG GTGCCGCCCT CGCCACCAGC AAGCGCATCG CAAAACTGGC CTTTACCGGC
TCCACTGAGG TGGGTAATCA CATCCTCAAA TGCGCCGCGG AAAACCTGAT CCCCTCAACC
GTGGAACTTG GCGGCAAGTC GCCCAACATC TACTTTGCCG ATGTGATGAA CCACGAAGAC
AACTACCTCG ACAAGGCCAT CGAGGGGATG TTGCTGGCCT TCTTCAACCA GGGCGAAGTG
TGCACCTGCC CAAGCCGGGT ACTGGTGCAG GAATCCATTT ACGATGCCTT TATTGAGAAG
GTCATTGCGC GTGCCAAAAC AATTCGTCAG GGCAGCCCGC TGGATACCGA CACCCAGGTG
GGCGCCCAGG CATCCCGCGA GCAATACGAC AAAATTTTAG GCTATCTGGA CATTGGCCGT
GCTGAAGGCG CCAAAGTACT GATGGGCGGA GAATTCAAAC TACAGGACGG CCCCGAAAAA
GGTGGTTATT ACATCCAGCC CACCATCCTC AAAGGCCACA ATAAGATGCG GGTGTTCCAG
GAAGAGATCT TTGGCCCCGT GGTATCGGTT ACCACCTTCA AAGACGAAGC CGAAGCATTG
GCCATTGCCA ACGATACCCA GTATGGCCTT GGTGCCGGTG TCTGGACCCG CGACATGAAT
CTGGCCCAGC GCATGGGCCG CGGCATTCAG GCTGGTCGGG TGTGGATTAA CTGCTACCAC
GCCTACCCTG CCCACGCTGC CTTTGGTGGC TATAAAAAGT CGGGCATCGG CCGTGAGACC
CACAAGATGA TGCTGTCTCA CTACCAGAAC ACCAAAAATC TACTGGTGAG TTTCGACACC
AATCCGCTGG GATTCTTTTA A
|
|---|
| Protein sequence | MIYSAPGTAG AIASFKARYD NFIGGKWVPP VGGEYFDNVS PVDGKVFCQA ARSDYRDIEL
ALDAAHAAKD SWGKTSVTER SNLLLKIADR VEQHLERLAV VETWENGKAV RETLNADLPL
FVDHFRYFAG CIRAQEGSAA DLDANTVSYH LPEPLGVVGQ IIPWNFPLLM AAWKIAPALA
AGNCVVLKPA EQTPASIMVL LETIEDLLPP GVLNVVNGFG AEAGAALATS KRIAKLAFTG
STEVGNHILK CAAENLIPST VELGGKSPNI YFADVMNHED NYLDKAIEGM LLAFFNQGEV
CTCPSRVLVQ ESIYDAFIEK VIARAKTIRQ GSPLDTDTQV GAQASREQYD KILGYLDIGR
AEGAKVLMGG EFKLQDGPEK GGYYIQPTIL KGHNKMRVFQ EEIFGPVVSV TTFKDEAEAL
AIANDTQYGL GAGVWTRDMN LAQRMGRGIQ AGRVWINCYH AYPAHAAFGG YKKSGIGRET
HKMMLSHYQN TKNLLVSFDT NPLGFF
|
|---|
| |