| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3430 |
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| Symbol | |
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| ID | 4605677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 4060090 |
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| End bp | 4060959 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639782850 |
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| Product | cation efflux family protein |
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| Protein accession | YP_929302 |
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| Protein GI | 119776562 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.038315 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.371724 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCGG AACGAAATTA TGCCTTCTGG GTCAAGCTTG CCAGCCGCGC GGCGGTGGCA
ACGGCCCTGA CACTGATTGT GATAAAACTG CTGGCCTGGC TTTGGTCCGG CTCGGCCAGT
ATGCTGGCAT CGCTTACCGA CTCCTTCGCC GATGCCCTGG CGTCCATCGT GAATTTCATT
GCCATCCGTT ATGCGTTGAC ACCGGCAGAT GATGAGCACA GGCATGGCCA CGGTAAGGCT
GAGCCGTTGG CGTCCCTGGC GCAGTCGGCG TTCATCTTGG GATCTGCCTT CCTGTTGCTG
TTTCATGGCG CCGAACGGCT CCTGAGTCCC GCGCCGCTGG AGCATGCCAT CCTGGGTATT
TGGGTCTCCG CCATTGCCAT TGTGCTCACG CTCGCGCTGG TGACATTACA GAAGAAGGCG
TTGGCCGCCA CCGGCAGCAC TGTGGTGGAG GCCGACTCGC TGCACTACAA GTCGGATTTG
TTTTTGAACG GCGCTGTGCT GCTGGCACTG GTGCTGGCCC AGTACGGACT CTGGTGGGCC
GACGGTCTGT TTGCGTTGTT GATAGCGCTC TATATCGGTC AGCAAGCCTT CGGACTGGGG
TATCGCTCGA TTCAGGCATT GCTGGACAGG GAACTCGATG AGGACATGCG CAGCGCCATT
GTGACCCTCG CCAAAGAAGA TGCCCGGGTG AGAGGTGTGC ACGACCTCAA GACCCGCCAG
GCTGGCCAAA CTATCTTTAT TCAGTTGCAT CTGGAGCTCG ATGGCGACTT GCCGCTTCGT
GAGGCACACC GCCTATCGGA CAAAACCTCG GCGCGTATCC GTACGGCTTT CCCCGAGGCG
GAAATCATCA TTCACCAGGA CCCGGTGTAA
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| Protein sequence | MSAERNYAFW VKLASRAAVA TALTLIVIKL LAWLWSGSAS MLASLTDSFA DALASIVNFI
AIRYALTPAD DEHRHGHGKA EPLASLAQSA FILGSAFLLL FHGAERLLSP APLEHAILGI
WVSAIAIVLT LALVTLQKKA LAATGSTVVE ADSLHYKSDL FLNGAVLLAL VLAQYGLWWA
DGLFALLIAL YIGQQAFGLG YRSIQALLDR ELDEDMRSAI VTLAKEDARV RGVHDLKTRQ
AGQTIFIQLH LELDGDLPLR EAHRLSDKTS ARIRTAFPEA EIIIHQDPV
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