| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3427 |
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| Symbol | |
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| ID | 4605674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4057060 |
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| End bp | 4058472 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639782847 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_929299 |
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| Protein GI | 119776559 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.234711 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATCA GTGAACAGGT TTGGATCCTC GACGACGACA GCTCTATCCG CTGGGTGCTG
GAAAAAGCCC TCAAGAGCGC CCGCATCACC AGCGCCAGCT TCGCCGCAGC AGAGTCTCTG
TGGCAGGCAT TGGAGCTGAG CCAGCCGCTG GTGATAGTGT CGGACATCCG CATGCCCGGC
ACCGATGGCT TAACGCTGCT GGAGCGTATT GGCCTGCATT ACCCCCATAT TCCGGTCATC
ATAATGACGG CGCACTCGGA CCTCGACAGC GCCGTGGCCG CTTACCAGTC CGGCGCCTTT
GAATACTTAC CCAAGCCCTT CGACATCGAC GAAGCCATCG CCCTGGTGGA GCGGGCACTG
ACCCATGCCA GTGAACAGGC GCCCCAGGCC AATACCAGTG AACCGGTCAA GGCACCGGAA
ATCATCGGTG AGGCCCCTGC CATGCAGGAG GTGTTTCGCG CTATCGGCCG TCTGTCACGC
TCATCCATCA GCGTACTGAT CAACGGCCAA TCCGGTACGG GCAAGGAATT GGTGGCAGGG
GCGCTGCACA AACACAGTCC CCGCAAGGAC AAGCCCTTTA TCGCGCTGAA CATGGCAGCC
ATTCCCAAGG ACCTGATTGA ATCTGAGCTG TTTGGCCACG AGAAAGGTGC CTTTACCGGC
GCTGCCGGTG TGCGTCAGGG CCGCTTCGAG CAGGCCAACG GTGGCACCCT GTTTTTGGAC
GAGATCGGCG ACATGCCCCT GGATGTGCAA ACCCGGCTGC TGCGGGTGCT GGCCGATGGT
CAGTTTTACC GTGTTGGTGG CCACTCACCG GTGCAGGTGG ACGTACGCAT TATTGCCGCC
ACCCACCAGG ATCTGGAGCG GTTGGTGCAA CAGGGGCAAT TCCGGGAAGA CCTGTTTCAC
CGCCTCAATG TGATCAGGGT GCATCTGCCA CCACTCAGGG AGCGCCGTGA AGATATTCCG
CAACTGACCC GCCACTTTCT GGCCGCCGCC GCCCGGGAGA TTGGCGTTGA AGCCAAGATA
CTTGCCAAAG AAACCGCCGC CAAACTGCAG CAGCTACCCT GGCCCGGCAA CGTGCGCCAG
TTGGAGAATA CCTGCCGCTG GCTCACAGTA ATGGCATCGG GGCAGGAGAT ACTGCCACAG
GACCTGCCAC CGGAGCTTTT TAAAGATCCG GTCGTCCATC ATGCCGGCGC CGTGGTGGCC
GGAGACTGGG AGAGTGCCCT GAGGGATATA GTCGATAGAC GCCTCGGTGA AGGGGAGTCG
GATCTGCTGG CTGACATGCA GCCCACCTTT GAGCGCATCA TGCTCGAAGT CGCGCTCAAA
CATACCCAGG GCCATAAACA GGAAGCCGCA CGACGTCTCG GCTGGGGCCG TAACACCCTT
ACCCGCAAAC TCAAAGAGCT TGAGATGGAT TAG
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| Protein sequence | MSISEQVWIL DDDSSIRWVL EKALKSARIT SASFAAAESL WQALELSQPL VIVSDIRMPG
TDGLTLLERI GLHYPHIPVI IMTAHSDLDS AVAAYQSGAF EYLPKPFDID EAIALVERAL
THASEQAPQA NTSEPVKAPE IIGEAPAMQE VFRAIGRLSR SSISVLINGQ SGTGKELVAG
ALHKHSPRKD KPFIALNMAA IPKDLIESEL FGHEKGAFTG AAGVRQGRFE QANGGTLFLD
EIGDMPLDVQ TRLLRVLADG QFYRVGGHSP VQVDVRIIAA THQDLERLVQ QGQFREDLFH
RLNVIRVHLP PLRERREDIP QLTRHFLAAA AREIGVEAKI LAKETAAKLQ QLPWPGNVRQ
LENTCRWLTV MASGQEILPQ DLPPELFKDP VVHHAGAVVA GDWESALRDI VDRRLGEGES
DLLADMQPTF ERIMLEVALK HTQGHKQEAA RRLGWGRNTL TRKLKELEMD
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