| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3426 |
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| Symbol | |
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| ID | 4605673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4055995 |
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| End bp | 4057041 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639782846 |
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| Product | nitrogen regulation protein |
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| Protein accession | YP_929298 |
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| Protein GI | 119776558 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.204004 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACTC AAAACCTGCT CAATCACCTG GTGACCGCTG TACTGGTCAT AGACTCAGGT
CTAAAACCCT GCTTTGCCAA TGCTGCTGCC GAGCAGTTGC TTGGCACCGG CAGTCATCGC
CTCAGCGAAC AAGCCCTGAC CGATATTTTT CAGTTGCAGG AAGTACCTGC CACCATACTG
GCCGATGCGG TACGTCAGGG ACTGGGGCTG ACGGTCAACA CCGCCAGCCT GGTCACCTTC
GATGGCCAAC ACCACACGGT GGATCTCACC CTGATCCCAC TGGAAAATGA ACCCGGCCTG
AGTTTGCTTG AGCTGCGTCA GGTGGACCAG CAGCGCCGTA TCCACCAACA ACTGACCCAG
GATGCCCAGC AGCAGGCGGC ACAGTTTCTG GTGCGTAACC TCGCCCACGA GATAAAAAAT
CCCCTCGGTG GCCTGCGGGG CGCGGCGCAG TTACTGTCCC GGGAGCTGGA AGATGAATCA
CTCAAGGAAT TCACCACCCT GATTATCGAA CAGGCCGATC GCATGCGCGC CCTGGTGGAT
AAGCTGCTGG GGCCACAAAA GCCCACGGCG CATCTGCCGC ACAACATCCA TGAAGTCGCT
GAAAAAGTGA TCAAGCTGGT TGAACTGTCC ACGCCTGCCA ATATCCGTGT CATCAGGGAC
TACGACCCTT CCATTCCCGA CATAGATTTG GACGCCGACC AGATGCAGCA GGCGCTGCTC
AACATAGTGC AAAACGCTGT GCAGGCACTG GAAAACAGCG GAGGCACCAT CACGGTGCGC
ACCCGCACCA GCCACCAGGT CACCATAGGC GCCCAGCGTC ACAAACTGGT GCTGATGTTG
TCTGTTATTG ATGATGGCCC GGGGATACCG CCGGAATTGA TGGATACCCT CTTCTACCCC
ATGGTAACCG GCCGCGAACA GGGCTCTGGC CTGGGGCTGT CCATCGCCCA CAACATCGCC
AGGCTTCATG GTGGCCGCAT CGACTGCGAC TCAGCCCCCG GTCACACCCA GTTTGTGCTC
ACCCTGCCCA TTAAAACCGG AAAATAG
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| Protein sequence | MDTQNLLNHL VTAVLVIDSG LKPCFANAAA EQLLGTGSHR LSEQALTDIF QLQEVPATIL
ADAVRQGLGL TVNTASLVTF DGQHHTVDLT LIPLENEPGL SLLELRQVDQ QRRIHQQLTQ
DAQQQAAQFL VRNLAHEIKN PLGGLRGAAQ LLSRELEDES LKEFTTLIIE QADRMRALVD
KLLGPQKPTA HLPHNIHEVA EKVIKLVELS TPANIRVIRD YDPSIPDIDL DADQMQQALL
NIVQNAVQAL ENSGGTITVR TRTSHQVTIG AQRHKLVLML SVIDDGPGIP PELMDTLFYP
MVTGREQGSG LGLSIAHNIA RLHGGRIDCD SAPGHTQFVL TLPIKTGK
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