Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3414 |
Symbol | |
ID | 4605661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 4040377 |
End bp | 4042410 |
Gene Length | 2034 bp |
Protein Length | 677 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639782834 |
Product | aminopeptidase-like protein |
Protein accession | YP_929286 |
Protein GI | 119776546 |
COG category | [R] General function prediction only |
COG ID | [COG2234] Predicted aminopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.543357 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACGA AAAAGCGGCT GCTGAGTCTG GCACTCTTGC TGTGCCCCCT CGGCGCCATG GCGGACGAGC TGTGGATTAT GACCGACAAG GACGCCGGAT ACAGTCTGCA AAGCCTGCTG CAAAGGCATA ACCTCCAGCC TCAGCTGCGG GAAAGCCATG GCAAACTCAT TACGCGTCTC AATGAAGATA AGCTGCTGGA ACTGAGCGCC CTGATGCACA AGGAGCACAA TCGCTGCGGC GGTTTCAGTG TGCATGCCAG CGAGGCCGAT GCCCTGGCCG CCAGTCTGGT GCCAGTGAGC CAGGCGACGT TCAGTTTCCC CGGCGAGCCC AATCAGGCGG CGCGGGTGGC GGACATTCTG CCAAGACTTA TGGCCAGCAA TATCAAGGAT ACCGTCACCA GCCTCGAGAC CTTCACCAAC CGCTACTACA CCACCAGTCA CGGTGAAAAT GCTGCCAATT GGGTAAAAGA CAACTGGGCA GCGTTGGCTA CCGGTAACAG CTGGGCCAAT GCTGCGGTGT ATGACCATGC CGACTGGCGG CAGGACTCAG TCGTCCTTAC CCTTACGGGC AGTGAAGCGC CGGATGAGGT GGTGATCCTC GGCGGCCACC TCGACTCCAT CAATGGCTAC ACCACAGAAA CCACCCGCGC CCCCGGCGCC GACGACAATG CCTCGGGCAT GGCCACCATC ACCGAGGTCA TTCGTGCCTT TATGAGTCAG GGCCAGCCCA AGCGCACCAT CAAGTTTATC GGCTATGCCG CTGAGGAAGT GGGTCTGCGT GGCAGCGCCG AGATAGCCGC ACAGGCCCGC AGCCAGGGGC AAAATGTGGT GGCGGTTATG CAGCTGGATA TGACCGGCTT TAATGGCAGC ACCGAAGACA TAGTGCTGAT GCAGGACTAC ACAGATTCGG GCCTGAATCA GTTTTTGATT AAGCTGATGG ATACCTACCA CACCGAAATC CGCTATGGCC TGGATGTGTG CGGCTATGGC TGTTCGGATC ATGCTTCCTG GCACAATCAG GGCTACCCTG CAGCCATGCC GTTCGAGTCG CGCTTCAACG ACTACAACCC CCATATTCAC ACCGCTCAGG ACACCCTGGA CAAACTCGAC CCCACCATGG AGCACGCACT CAACTTTGCC AAGCTGGCCT CGAGCTATCT GGTGGAGCTC AGCTTTAACA CCGGTGGCAC CGGCCCCGAA ACCGGCGAGC TTGAAAATGG CGTGGCCCTC ACCGGGCTCA GCGCCGCCAA GGATGCCCAG AGCTATTTCA CCCTGGCGGT ACCGGCCGAT GCCGAGAATC TGCGCTTTGT CACCGCCGCG AACAATGGCG ATGCCGATCT GTACGTGAAG TTTGGCGCGC CGCCGTCGAC CTCAGATTTT GACTGCCGCT CCTGGAATAA CGGCAGCAAT GAGAGCTGCG ATCTGGCCCA GGCTACCGAG GGCACCTGGC ATGTGATGCT GAAAGCCTAC AACGCTTACT CTGATTTAAG CCTCACCGGC AGCTTTGATG TCTCGACCCC AACCCCCAAC CAGCCTCCGG TGTCCAACTT CAGCGTCAGC TTTAACGGTG CAACCGGCCA GTTTGTCTCC AGCGCCAACG ACAGCGATGG TCAACTGGTA AGCTGGCAGT GGAGTTTTGG TGATGGCAGC AGCGCCAGCG GTGCCAATGT CAGCCACACT TACAGCCAGT CTGGCCGTTA CACGGTTTCG CTTACTGTCA CCGATGATGA TGGCGCCAGT GCAACCAGCA GCCAGAGCGT CGATATGACG GTGCCAGAGC CGCCACAGGG CGACATTGAG CTCACGGTAA CCAAGGCCAC CAAATCGCGT CTTGGCAGTG TTTATGTGGC GCTGAGTTGG GACACTGGCT CCGGCGATTA CCGGGTGCTG CGTGATGGCG TACAAATTGG CACAAGCAGC CGCAGCAGCT ATACCGACCG CTTTAAAGTC GGCAAAAATG AGGCTGTCTC GGTAAGCTAT CAGGTATGTG ACAACAGCAA TGCCTGCTCG CAAATGGTGC AGGTAAATCT GTAA
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Protein sequence | MKTKKRLLSL ALLLCPLGAM ADELWIMTDK DAGYSLQSLL QRHNLQPQLR ESHGKLITRL NEDKLLELSA LMHKEHNRCG GFSVHASEAD ALAASLVPVS QATFSFPGEP NQAARVADIL PRLMASNIKD TVTSLETFTN RYYTTSHGEN AANWVKDNWA ALATGNSWAN AAVYDHADWR QDSVVLTLTG SEAPDEVVIL GGHLDSINGY TTETTRAPGA DDNASGMATI TEVIRAFMSQ GQPKRTIKFI GYAAEEVGLR GSAEIAAQAR SQGQNVVAVM QLDMTGFNGS TEDIVLMQDY TDSGLNQFLI KLMDTYHTEI RYGLDVCGYG CSDHASWHNQ GYPAAMPFES RFNDYNPHIH TAQDTLDKLD PTMEHALNFA KLASSYLVEL SFNTGGTGPE TGELENGVAL TGLSAAKDAQ SYFTLAVPAD AENLRFVTAA NNGDADLYVK FGAPPSTSDF DCRSWNNGSN ESCDLAQATE GTWHVMLKAY NAYSDLSLTG SFDVSTPTPN QPPVSNFSVS FNGATGQFVS SANDSDGQLV SWQWSFGDGS SASGANVSHT YSQSGRYTVS LTVTDDDGAS ATSSQSVDMT VPEPPQGDIE LTVTKATKSR LGSVYVALSW DTGSGDYRVL RDGVQIGTSS RSSYTDRFKV GKNEAVSVSY QVCDNSNACS QMVQVNL
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