Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3406 |
Symbol | |
ID | 4605653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 4031533 |
End bp | 4032186 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639782826 |
Product | hypothetical protein |
Protein accession | YP_929278 |
Protein GI | 119776538 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACAAC TTCTCTCGCT GGCGCTGCTT GGCAGTGCTT TATTACTCGG TGGTTGCCAG AGTGCTTACT ATGGCGCCAT GGAAAAGGTG GGCTATCACA AGCGCGACAT CATGGTTGAC CGGGTGAAAG ACGCCAAAGA GTCCCAGGAA GAAGCACAGC AGCAGTTCAG TTCGGCACTG GAAGAAATGC AGGCCTTGCT GAACCACGAT GGCGGCGATC TGGAAAAGGC GTACAACAAG GCCAAAGACG AGTACGACTC AGCCCAAAGC GCGGCCGACG ACGTATCAAA CCGCATCGAC AAAGTCGAAG ACGTAGCCGA GGCACTGTTT GATGAGTGGC AGGCGGAAAT AGCCGAAATC AGCAAGGCCA GCCTGCGATC AAAAAGCCAG AGCAAGCTGA AGGAAACCCG CCGCAATTAC GAATCGCTGA TGCGCAGCAT GCGCCGTGCA GAAAGCAAGA TGCCGCCCAT ACTGACATCA ATGAAAGACA ACATGCTGTA CCTCAAGCAC AACCTCAATG CCCAAACCAT TGGCGCCATC AAGGGGGAAT TTACCAGCTT GAAGACAGAC ATAACCGGGC TCATCAAGGA GATGAATCGC TCCATTGCCG AGTCCAATAA GTTTATCGCC GCCATGGAAG CCGCAGGCCA GTAA
|
Protein sequence | MKQLLSLALL GSALLLGGCQ SAYYGAMEKV GYHKRDIMVD RVKDAKESQE EAQQQFSSAL EEMQALLNHD GGDLEKAYNK AKDEYDSAQS AADDVSNRID KVEDVAEALF DEWQAEIAEI SKASLRSKSQ SKLKETRRNY ESLMRSMRRA ESKMPPILTS MKDNMLYLKH NLNAQTIGAI KGEFTSLKTD ITGLIKEMNR SIAESNKFIA AMEAAGQ
|
| |