| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3404 |
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| Symbol | rbn |
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| ID | 4605651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 4030230 |
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| End bp | 4031141 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639782824 |
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| Product | ribonuclease BN |
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| Protein accession | YP_929276 |
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| Protein GI | 119776536 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1295] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCCATC TTGTCTCTCG CCTGAAAGAA GACCAAATTA ATGTGCGCGC AGGGCACCTT
ACCTATGTCA CCCTCTTGTC GCTGGTGCCC ATGGTGGCCG TGACCATGTC GGTATTATCG
GCATTCCCGG TGTTTCAGGG TATTCGCGGC ACCATAGAAA CCTTCGTGTA TGAAAACATG
ATCCCCGCCG CCGGTGACAC GGTACAAACC TATATCAACG AATTTGTGAA AAACGCCTCC
AAAGGCACGG CCGTGGGGAT TGGTTTTCTG GTGGTAGTGG CCATCATGTT GATTTCGGCC
ATCGATAAGT CACTCAATGC CATTTGGCGC ACCAAAGAAA AGCGCCGTTT TATGGTGGCC
TTTTCCATGT ACTGGATGGT GTTGACCCTG GGCCCTGTGC TGATGGGGGC CAGTATTGCC
GTGACGTCTT ATCTGGTATC CCTGAAAGTA CTCAGTGAGG CTGATGTGTA TGGGGTGGTG
CCCATGCTGA TAGAGAAGCT GCCGCTGATG TTTTCTGTTG CAGCATTTTT GCTGCTGTAT
ATGGCGGTGC CCAATCAAAA GGTGAAATTT CTCCATGCGC TGCTCGGTGC CCTGGTGGCA
GCCTTGTTGT TTGAGGCCGG TAAGCGTGGT TTTGCCCTTT ATGTCACCAC CTTTCCGAGT
TATGAGGCCA TTTACGGCAC CCTGGCGACC ATTCCCATCC TCTTTGTCTG GGTGTATCTC
TCCTGGACCA TAGTGCTCTT TGGCGGTGTG ATTGCCGCAG CGCTGCCTGA ATATCTGGAC
TATGATGACG GCGGCGACGA AGACGCCCAG GGCTGCCAGG ATGCCCCTTC GGGTGAAGCC
TTGTCATCGC CAAAGGAAAA TCCTTCCTCT TCATCCTCCA CCAAACCCAA AACCGACAAT
GACCCGGGTT GA
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| Protein sequence | MLHLVSRLKE DQINVRAGHL TYVTLLSLVP MVAVTMSVLS AFPVFQGIRG TIETFVYENM
IPAAGDTVQT YINEFVKNAS KGTAVGIGFL VVVAIMLISA IDKSLNAIWR TKEKRRFMVA
FSMYWMVLTL GPVLMGASIA VTSYLVSLKV LSEADVYGVV PMLIEKLPLM FSVAAFLLLY
MAVPNQKVKF LHALLGALVA ALLFEAGKRG FALYVTTFPS YEAIYGTLAT IPILFVWVYL
SWTIVLFGGV IAAALPEYLD YDDGGDEDAQ GCQDAPSGEA LSSPKENPSS SSSTKPKTDN
DPG
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