| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3398 |
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| Symbol | |
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| ID | 4605645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 4025623 |
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| End bp | 4026213 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639782818 |
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| Product | (Acyl-carrier-protein) phosphodiesterase |
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| Protein accession | YP_929270 |
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| Protein GI | 119776530 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1182] Acyl carrier protein phosphodiesterase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.27302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAAAGG TATTAGTGCT CAAGTCCAGC ATTCTTGGTG ATTTTTCCCA GTCTGGCCGC
TTGATTGATG AATGGGTTGC TGCGCGCCGC GCGAGTGGCG ATACAGTGAC AGTGCGCGAT
TTGGCTGCCG AGCCATTGCC GGTGCTTGAC GGTGAAATTG CGTCGGGTCT GCGTGGTGGC
GAGAGTTTAA GTCCCCGTCA GCAAGAAGCA TTGGCACTGT CCGATGCCTT GATTGCCGAG
CTCAAAGTGC ACGATCAACT GGTGGTAGCG GCCCCCATGT ACAACTTCAG TATCCCCACT
CAGCTGAAAA ACTGGATAGA TCTGGTGGCC CGTGCCGGCG TGACCTTTAC CTACACAGCC
GAAGGTCCAC AGGGACTTAT CCAGGGCAAG CAGGCCATGC TGATCACGAC CCGCGGCGGA
GTACACAAGG GCTCAGGCAG TGACCATGTG GTGCCTTATC TGAAAACCGT ACTCGGATTT
ATCGGTATCA CTGATGTGGA TACCGTGTAC GCCGAAGCCC TGAGCATGGG GCCGGAAGCG
GCAGAGCGTG GCATCAAGGA TGCCCGTGAC CAGCTGGCGC TGGTGGGTTA A
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| Protein sequence | MSKVLVLKSS ILGDFSQSGR LIDEWVAARR ASGDTVTVRD LAAEPLPVLD GEIASGLRGG
ESLSPRQQEA LALSDALIAE LKVHDQLVVA APMYNFSIPT QLKNWIDLVA RAGVTFTYTA
EGPQGLIQGK QAMLITTRGG VHKGSGSDHV VPYLKTVLGF IGITDVDTVY AEALSMGPEA
AERGIKDARD QLALVG
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