Gene Sama_3397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3397 
Symbol 
ID4605644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4025099 
End bp4025416 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content60% 
IMG OID639782817 
Productphage shock protein E 
Protein accessionYP_929269 
Protein GI119776529 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.127834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCACT CTATGCTCGC CAGATTATCC GGCAGCGCTC AGCCCGCCGA ATGCTGGCAA 
CTGGTGAAAC ATGGCGCCAC CCTGGTGGAT GTCAGAAGTC CGGCGGAATT TGCCCAGGGC
CATCTGCCCC AGGCACTCAA CATCCCCCTG GATACGCTGG AACACTGGCA ATCGGCTCAG
GCCGATAAGG CCGTGCCGCT GGTGCTCTAT TGCGGCGCCG GTATTCGCGC CCAAAAAGGA
TGCGACATCC TCAGAGCCAA GGGGTTCAGC TCTGTGATCA ATGGCGGCGC CATCAAGGAT
TTACTGGCGG GCGCTTAA
 
Protein sequence
MLHSMLARLS GSAQPAECWQ LVKHGATLVD VRSPAEFAQG HLPQALNIPL DTLEHWQSAQ 
ADKAVPLVLY CGAGIRAQKG CDILRAKGFS SVINGGAIKD LLAGA