| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3388 |
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| Symbol | |
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| ID | 4605635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4014965 |
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| End bp | 4017364 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639782808 |
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| Product | hypothetical protein |
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| Protein accession | YP_929260 |
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| Protein GI | 119776520 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4258] Predicted exporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTTG GGGGAAGCAA AATCACAGAT AAGCCACAGA CTGCAAGCCG CGCAGGGCTC
AGGCTGGCCC TATGGCTGCT CTTGCTCGCC GCAGCCCTCG TTTTCGGCAT TAAGACTCTC
AAGCACCGCG ATGTGGTTGA AACCGACATT CTGGCCATGC TGCCCCACTT GCAGCAGGAT
GCCCTCACCA GCCGCGCGCT GGACAGTCTC GAAAGTCGTC TGGCTAACGA AAGCTATCTG
GTGCTGACGG GGAAAGACAA GGCCGCAACC ATCGAAGCCG CCAAGGGCAT GATGGCCGAA
CTTGCCAGTT CCCCCGCATT CGTATCGGTT CGCAGCGGCA GCGAACTCGA TCCCAAAGAG
ATTTACCGGC TCTACTTTCC GGCCCGCTTC AACCTGCTGA CCGAATCACA ACGCTCACTG
CTGGAAAACG GCAAACTCGA TGTACTCATC AAGCAAGCGA AAATTGCCCT CTACAGCGCT
TTTGGTTTTG CCAACAGTGA ACTTATCAGC GAAGACCCCT TGTTACTGTT TCCGGCGCTG
ATGCAAAGCT TTGGCAAAGG CCACCGCCTC GGTGAGGAAG GTGGCATCTT GCTTGGCAAC
TCAGATGGCC AAACCGCCGC AATCATCATG GCCAAGGGCA AAGACAGCGT ATTCAGCCCC
AAGGCGCAGG AAGCCCAAAT CAGTGCCATC AATGCCGCCT TCACCAAGGT AAACCTGGGC
AAGCAACTGA GCCTGCTAAA GGCCGGTGCC CTGTTTCATG CACTTGAGGC CACTCAAAGC
GCCAAGGCAG AAGTATCACT GATTGGCTCA CTGTCGCTTG CGGGCGTGGT AGTGCTGGTG
CTTTTGAGCT TCCGTTCGCT GATGCCGCTT TTGATGGCAA GCCTTACCCT CGCCAGTGCT
ATGGTGAGCG CCAGCCTGTT CACCATCCTC ATTTTCGGCA AGTTACACCT GCTCACTCTG
GTGTTTGGCA CTTCTCTGAT TGGCATTGCC ATCGACTACA GTTTCCATTT TTATGCCGAG
CGCAGTGGCC GTGATGAGAG CGCCAGCCAA ACACTGAGCC GCATCTTGCC CGCACTGACG
CTGGCCCTTG CTACCAGCGT GCTCGCCTAT CTGGCGCTGG GCTTCACTCC CTTCCCGGGG
ATGCAGCAGG TAGCGGCCTT TTGTGGCGGC GGCCTGATTG GCGCATACCT CACGCTGTAT
CTTGCTTACC CCATGCTGGC AGACAGCCGC ATTCAGGCCG CAAGCGCGGC CATCACCCTG
GCCAGCCGCT TTCTTACCCC GTTCGAAGCC GCAGGCTCCA AAGCCTTGGT GATTGGCAGC
CTGACAGTGC TCTTGGTGTG CATCCCTGGA CTTGGCCAAC TGGACAGCCG CGACGATATC
CGCAGCCTGC AACAGGGCTC GGCAGCACTG ATGGCTGAAG AAGCTAACGT GAGAACCTTG
CTCTCGGGTG GGGTGGATAA TCAGTTTCTG CTGGTACGGG CAGAGTCGAT GCAGACGCTG
CTCGCAAGAC TCGAAGCCCT TGCGCCTGTA CTCGCAAAAG CCGAAAAAGA CCAACTGCTG
CAAAGCCATG TGAACTTTGC CGATTACCTG CCATCCCAGG CGCGGCAGAT GGCCGACCAT
AACCTGCAAC AGCAAATCTA TGGTCATGAA CTGGGTGAAA TACTCGCCCG CTTGGGGCTG
GAGCCTGAAC TCGAACCTGA TCTCAGAGCC AAATACCAGG CCGGTGCACA AACGCCCATC
GAAGCGGATG CCTTTTTTGA CACCCGGCTT GGGGCAAACC TCAAGCCACT GCTGCTTGAG
CCCACGGCTA ACGAGGCCAA CCATCCAGAA TCAACTGCCC GGGAATGGGG CGCCATGGTG
CTGCTTGGTG GCATTCAGAA CTTACCGGCA CTTAACCAAG CGGTAGCGAC TTTGCCGGGG
GTAACTCTGG TGGATAAGGT GGGCGACATC TCCAAACTGA TGGGAGAGTA CCGCCACACC
ACCCTGTGGC TGCTGGTGCT GGCGCTGCTT ATTGCCTTTG GAGTCTTTGC CCTGCGTCAC
CCATGGAAAC TTGCCGCCGC CATGGTGGCA GTACCGGCGC TGGCGGCACT GCTCAGCTTG
TCACTGCTGG GGCTGCTGGG GTCGCCACTG ACTTTATTCC ATGCGCTGGC GCTGCTTTTG
GTATTCGGCA TTGGCGTTGA TTACAGCCTG TTTTTCGCCA AGGATGAAAA CCGGGAGCAT
GGCCACAGAG TTATGCTGGC TGTGCTGCTG TCAGCCAGCT CCACCACCCT CGCCTTTGGT
CTGCTGGCGC TCAGTAACAC CCCGGCAATA CACTATTTTG GCCTCACGCT GGCCCTCGGG
ATTGGCTTTA CCCTGCTGCT CTCGCCCCTT ATTCACACTT TCAAAAGGAA ACTGAAGTAG
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| Protein sequence | MALGGSKITD KPQTASRAGL RLALWLLLLA AALVFGIKTL KHRDVVETDI LAMLPHLQQD
ALTSRALDSL ESRLANESYL VLTGKDKAAT IEAAKGMMAE LASSPAFVSV RSGSELDPKE
IYRLYFPARF NLLTESQRSL LENGKLDVLI KQAKIALYSA FGFANSELIS EDPLLLFPAL
MQSFGKGHRL GEEGGILLGN SDGQTAAIIM AKGKDSVFSP KAQEAQISAI NAAFTKVNLG
KQLSLLKAGA LFHALEATQS AKAEVSLIGS LSLAGVVVLV LLSFRSLMPL LMASLTLASA
MVSASLFTIL IFGKLHLLTL VFGTSLIGIA IDYSFHFYAE RSGRDESASQ TLSRILPALT
LALATSVLAY LALGFTPFPG MQQVAAFCGG GLIGAYLTLY LAYPMLADSR IQAASAAITL
ASRFLTPFEA AGSKALVIGS LTVLLVCIPG LGQLDSRDDI RSLQQGSAAL MAEEANVRTL
LSGGVDNQFL LVRAESMQTL LARLEALAPV LAKAEKDQLL QSHVNFADYL PSQARQMADH
NLQQQIYGHE LGEILARLGL EPELEPDLRA KYQAGAQTPI EADAFFDTRL GANLKPLLLE
PTANEANHPE STAREWGAMV LLGGIQNLPA LNQAVATLPG VTLVDKVGDI SKLMGEYRHT
TLWLLVLALL IAFGVFALRH PWKLAAAMVA VPALAALLSL SLLGLLGSPL TLFHALALLL
VFGIGVDYSL FFAKDENREH GHRVMLAVLL SASSTTLAFG LLALSNTPAI HYFGLTLALG
IGFTLLLSPL IHTFKRKLK
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