Gene Sama_3387 details

Gene Information

• Locus tag: Sama_3387
• ID: 4605634
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella amazonensis SB2B
• Kingdom: Bacteria
• Replicon accession: NC_008700
• Strand: +
• Start bp: 4014228
• End bp: 4014959
• Gene Length: 732 bp
• Protein Length: 243 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 639782807
• Product: hypothetical protein
• Protein accession: YP_929259
• Protein GI: 119776519

Plasmid Coverage information

• Num covering plasmid clones: 39
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 18
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGGCTGA TTGTTAAGTT TTGCGTTGGA ATACTGGCAT CTATGCTGGT CTGGCTGCCA 
GCGCAGGCAG ATGAAGCCCT AAGCCAGAAG AGTATGACCC AGAACGCCGA CGTCAATCTC 
GGGGCGCTCA GCACTGCCCT TAAGCCACAG GGAGCGGTGC GCGGCGAGTT TGAACAGACC 
CGCACCCTCA AGGCGTTAAA GCGACCTCTG GTCAGCCGTG GCAGCTTTGT GTTCTCACCC 
GACCAAGGCC TGATGTGGGC ACAAAACCAG CCCTTTGAAA ACTTACTGAT TTTAAGCGAA 
ACGCGCATGT TGAGCCGCGA CAGCGAAGGC CTGTGGCAAC AAACCGAGGT CAATGCCAAA 
GCGGGCCCAG CTACCTTAAT GCCCATGCTG GTGAAGGCCA TGATGGGCGG CGATATGGCT 
ACGCTGGAGC GACATTTCTC ACTGGCATTA AGCAGTCAGG AGAATCACTG GCAACTGACC 
CTCGCCCCAA AAGATGAGGA TATCAAGGCA CTGTTTGCCG CTATCGAGCT TGAAGGCAGT 
TTTATCGGCG ATGCAGGCAC CACGCAGCAA ACAGGCACCC AGACCAGAAC AGACAAGGCC 
AGTACAAACA GGCTGAAACT TATCAGCCCC AATGGCGATG TGAGCGATAT CCGCTTCAGC 
AACCAGCAAA GCGGGCCGCT GTCGGAGCAA GAACTGCAGG CCTTTATCCC GCAAATTGAG 
TCGGGGCAAT AA 

 

Protein sequence

MGLIVKFCVG ILASMLVWLP AQADEALSQK SMTQNADVNL GALSTALKPQ GAVRGEFEQT 
RTLKALKRPL VSRGSFVFSP DQGLMWAQNQ PFENLLILSE TRMLSRDSEG LWQQTEVNAK 
AGPATLMPML VKAMMGGDMA TLERHFSLAL SSQENHWQLT LAPKDEDIKA LFAAIELEGS 
FIGDAGTTQQ TGTQTRTDKA STNRLKLISP NGDVSDIRFS NQQSGPLSEQ ELQAFIPQIE 
SGQ