Gene Sama_3383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3383 
Symbol 
ID4605630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4010131 
End bp4010493 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content55% 
IMG OID639782803 
Productthioester dehydrase family protein 
Protein accessionYP_929255 
Protein GI119776515 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAGT CATTGCTGCC GCACGTGCTC TCCCGCGAAG AGACAGATAC AGAGCTGAAA 
CTCAGGCTCG CCATCGATGC CCACCTGCCG TTTTTCGATG GCCACTTTCC GGGACAAAGC
GTACTGCCGG GGGTAACCCA ACTCGATTGG GCGGTACGTT TTGGCTGCGA GCATTTTGGC
TATAATGCCA GCGTGGCGAA TCTGGAAGTG CTTAAGTTTC AACAGCTGAT ACTGCCCGGC
ACTGAAGTGG ATTTGCTGAT AAGCAACAAC GCCGCCAAGG GCAAACTCAC CTTCGCTTAC
AGTGATGGTG AGCGCCGATT CGGCTCAGGT CGGATAGTGA TTGCCGCGCA CGGGGACAGC
TGA
 
Protein sequence
MIKSLLPHVL SREETDTELK LRLAIDAHLP FFDGHFPGQS VLPGVTQLDW AVRFGCEHFG 
YNASVANLEV LKFQQLILPG TEVDLLISNN AAKGKLTFAY SDGERRFGSG RIVIAAHGDS