Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3376 |
Symbol | |
ID | 4605623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 4005077 |
End bp | 4005964 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639782796 |
Product | hypothetical protein |
Protein accession | YP_929248 |
Protein GI | 119776508 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGTCA ATCCCGAAGA CAGAATCACC CCGCAGGAAG AAACCTCCCA GCGCAGCAAC CGTCTGTCGG CCCTGCTGAT CCTGGCTCTG ATAGCCATTG CCGCCGGCCT ATGGATGTAT TTTACCCGCG CACCCGAGCC CGCGCCTGTG GTGGACGTGC CGACAGAAGC CCCCCAGCCA ACGCCTCTGC CCGAATCCGC GGTGACTGCA ATCGAACCCG AACCCGAGCC GGAGCCTGAG GCCCAGTTCG AGCCAGAACA AGTGACCAAT ACACCCGAAG AAGTCATACC TGAAGTCACT GTAGATCCCA TTCCTGAGCT GGCAGAAAGC GATACTTTTG CAACCCAAAA AGCTATCGCA TTGGCCGGTA GTCTGCCGGT CGAACCCATC ATTGCCCAGC AAGATCTGGT ACGCCACTTC GTGGTCTTTA TGGATAACCT GGCCGAAGGC CAGCTGGCAC GCAAACAAAG CCCACTCAAG GGCCCTGAAA CAAAATTCAC CGTCAGCGAA ATCACCGCCA AGACCTATTT AAACCCCGAC AGCTACAAGC GCTACGATTT GTATGCCAAT TACATTGCCA ATTTAAATGA AGAGAAACTG CTGGAAACTT ATGCCCAGAT GACACCCATG CTGGAGCAGG CCTTCGATGA ATTGGGTTAC GGTAATGTCA GTTTCAAAGA ACGCAGCCTC AAGGCCATCG ATCAACTGCT GGCAGCACCC ATCATCGAAT CACCCATAGA ACTGGTCACC TTCAGCGTCA ACTACAAGTT TGCCGATCCC GAGCTGGAAG CCCTGCCACC GGCACAGAAA CTGATGATAC GCATGGGCCC GACAAACAGT CGCAAGGTGA AAGCCGCGCT GAAGAAACTG CGGCCATTGT TGCAATAA
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Protein sequence | MQVNPEDRIT PQEETSQRSN RLSALLILAL IAIAAGLWMY FTRAPEPAPV VDVPTEAPQP TPLPESAVTA IEPEPEPEPE AQFEPEQVTN TPEEVIPEVT VDPIPELAES DTFATQKAIA LAGSLPVEPI IAQQDLVRHF VVFMDNLAEG QLARKQSPLK GPETKFTVSE ITAKTYLNPD SYKRYDLYAN YIANLNEEKL LETYAQMTPM LEQAFDELGY GNVSFKERSL KAIDQLLAAP IIESPIELVT FSVNYKFADP ELEALPPAQK LMIRMGPTNS RKVKAALKKL RPLLQ
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