Gene Sama_3376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3376 
Symbol 
ID4605623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4005077 
End bp4005964 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content54% 
IMG OID639782796 
Producthypothetical protein 
Protein accessionYP_929248 
Protein GI119776508 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTCA ATCCCGAAGA CAGAATCACC CCGCAGGAAG AAACCTCCCA GCGCAGCAAC 
CGTCTGTCGG CCCTGCTGAT CCTGGCTCTG ATAGCCATTG CCGCCGGCCT ATGGATGTAT
TTTACCCGCG CACCCGAGCC CGCGCCTGTG GTGGACGTGC CGACAGAAGC CCCCCAGCCA
ACGCCTCTGC CCGAATCCGC GGTGACTGCA ATCGAACCCG AACCCGAGCC GGAGCCTGAG
GCCCAGTTCG AGCCAGAACA AGTGACCAAT ACACCCGAAG AAGTCATACC TGAAGTCACT
GTAGATCCCA TTCCTGAGCT GGCAGAAAGC GATACTTTTG CAACCCAAAA AGCTATCGCA
TTGGCCGGTA GTCTGCCGGT CGAACCCATC ATTGCCCAGC AAGATCTGGT ACGCCACTTC
GTGGTCTTTA TGGATAACCT GGCCGAAGGC CAGCTGGCAC GCAAACAAAG CCCACTCAAG
GGCCCTGAAA CAAAATTCAC CGTCAGCGAA ATCACCGCCA AGACCTATTT AAACCCCGAC
AGCTACAAGC GCTACGATTT GTATGCCAAT TACATTGCCA ATTTAAATGA AGAGAAACTG
CTGGAAACTT ATGCCCAGAT GACACCCATG CTGGAGCAGG CCTTCGATGA ATTGGGTTAC
GGTAATGTCA GTTTCAAAGA ACGCAGCCTC AAGGCCATCG ATCAACTGCT GGCAGCACCC
ATCATCGAAT CACCCATAGA ACTGGTCACC TTCAGCGTCA ACTACAAGTT TGCCGATCCC
GAGCTGGAAG CCCTGCCACC GGCACAGAAA CTGATGATAC GCATGGGCCC GACAAACAGT
CGCAAGGTGA AAGCCGCGCT GAAGAAACTG CGGCCATTGT TGCAATAA
 
Protein sequence
MQVNPEDRIT PQEETSQRSN RLSALLILAL IAIAAGLWMY FTRAPEPAPV VDVPTEAPQP 
TPLPESAVTA IEPEPEPEPE AQFEPEQVTN TPEEVIPEVT VDPIPELAES DTFATQKAIA
LAGSLPVEPI IAQQDLVRHF VVFMDNLAEG QLARKQSPLK GPETKFTVSE ITAKTYLNPD
SYKRYDLYAN YIANLNEEKL LETYAQMTPM LEQAFDELGY GNVSFKERSL KAIDQLLAAP
IIESPIELVT FSVNYKFADP ELEALPPAQK LMIRMGPTNS RKVKAALKKL RPLLQ