Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3375 |
Symbol | |
ID | 4605622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 4002900 |
End bp | 4004975 |
Gene Length | 2076 bp |
Protein Length | 691 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639782795 |
Product | ATP-dependent DNA helicase RecG |
Protein accession | YP_929247 |
Protein GI | 119776507 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1200] RecG-like helicase |
TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCAAAGAC TGGATCTTGT TCCCGTAACC GAACTCAAGG GCGTGGCGGC CCGGGTCGCA GAAAAACTCA GTAAACTGGG GGTGAATACC GTCCAGGATT TACTGTTTCA TCTGCCGCTG CGTTACGAAG ACAGAACCCG CATCTATGCC ATTGATGAAC TTATCCCAGG CACCACAGCC ACCATCGAAG CCGAAGTCAT TTCCAGCCAG ATCGTCAATG GCCGCAAGCG CATGCTCACC TGCAACGTGC GCGACGCCAG TGGTGGCCTG ACCTTACGTT TTTTCAATTT TTCCATGGCG CAAAAGAATG GCTTGCAGCC AGGCATGACT ATCCGCGCCT TTGGGGAAAT CCGTACCGGC AAGCATCAGC TGGAAATCAT CCATCCGGAA TACAAGCTCA CGGCGGCCGG CGAATCACCT AGCCTGGCCG ACACCTTGAC GCCCATCTAT CCCACTACCG AAGGCCTGAA GCAAGCCAGC TGGATACGGC TTACAGCACA GGCGCTGGAG CAATTGGAAG AAGGAGGGCT TCCGGAGCTT CTGCCCGAGT CATTACAGCC CAACCGTTTA AGCCTGGCCG ATGCCGTGCG CACCCTGCAC CGCCCTCCGG CGGATGCCGA ACTGTGGCAG TTGGAGCAAG GCCAGCACCC GGCGCAGCAG CGGCTGGTGC AGGAAGAGCT GCTGGCCCAT AACTTAAGCA TGTTAAAGCT TCGGGAGCGC AGCAATCAGG ATGCCGCTGA GCCCTTGGCT GCCACGGGTC AGCTTATCCC CCGTTTTCTT GAGAGCCTGC CATTTGCCCC AACCAATGCC CAGTCACGGG TAGTTGCTGA GATCCATGCC GATATGACCA AAGCCACCCC CATGATGCGT CTGGTGCAGG GTGACGTGGG CTCGGGCAAA ACCCTGGTAG CGGCACTATC TGCGCTGGCG GCCATCGAAA ATGGCTGTCA GGTCGCCTTG ATGGCCCCCA CCGAGCTTTT GGCCGAGCAG CATGCCGCCA ACTTTGCCCG CTGGTTTGAG CCGCTGGGGC TGAAAGTTGG CTGGCTTGCC GGCAAACTCA AAGGCAAGGC CCGCACTCAA ACGCTGGAAG ACATCGCCTC CGGCGCCGCC CAGATGATAG TGGGCACTCA CGCCATTTTT CAGGAACAGG TGAGCTTTTC CCGCCTCGCC CTTACCATCA TCGACGAGCA GCACCGCTTT GGCGTACACC AGCGTCTGGG ACTGCGTGAA AAAGGCATTC AGCAGGGCTT TTTCCCTCAT CAGCTGATCA TGACCGCCAC CCCCATCCCC CGCACATTGG CAATGACCGC CTATGCAGAT CTCGACACCT CGATTATTGA TGAGCTGCCG CCGGGGCGAA CTCCCATCAC CACGGTTGCC ATTCCCGACA CCCGCCGGCT GGATGTGATT GAGCGGGTGC GACAGGCCGC CTTACAGGAC AAGCGTCAGG CCTATTGGGT GTGCACCCTG ATTGAAGAGT CGGAAGTACT CGAATGTCAG GCCGCCGAAG ACACCGCTGG GGGTCTGAAA GAAGCCCTGC CAGAGCTTGG CATTGGGCTG GTACACGGCC GGATGAAGGG CGCCGAAAAG CAGGCCATCA TGGCCGACTT CAAAGCAGGC AAGCTCGACT TACTGGTTGC CACCACGGTT ATCGAAGTGG GTGTGGATGT GCCCAATGCA AGTTTGATGA TAATCGAAAA CCCCGAACGG CTGGGGCTTG CCCAGTTGCA TCAGCTGCGG GGGCGGGTTG GCCGCGGCGC AGTGGCCAGC CACTGCGTAC TGCTGTACAA GGCGCCGCTC AGCTTTACCG CTCAGGCGCG TCTTGGGGTG CTGCGGGAAA GTAACGACGG CTTTGTGATT GCCCAGAAAG ATCTGGAGCT GCGTGGCCCC GGCGAGGTGC TCGGTACGCG CCAGACGGGG CTTGCGCAAA TGAAGGTGGC CGATTTGGTA CGGGATCAGG CGCTTATTCC CCACATCCAA AAACTGGCGC GGCATCTGAT GACCCAGGCC CCCGACAATG TGGATGCCAT AATTGAGCGT TGGCTTGGCG GCCGCGAGCA ATACGTACAG GCCTAG
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Protein sequence | MQRLDLVPVT ELKGVAARVA EKLSKLGVNT VQDLLFHLPL RYEDRTRIYA IDELIPGTTA TIEAEVISSQ IVNGRKRMLT CNVRDASGGL TLRFFNFSMA QKNGLQPGMT IRAFGEIRTG KHQLEIIHPE YKLTAAGESP SLADTLTPIY PTTEGLKQAS WIRLTAQALE QLEEGGLPEL LPESLQPNRL SLADAVRTLH RPPADAELWQ LEQGQHPAQQ RLVQEELLAH NLSMLKLRER SNQDAAEPLA ATGQLIPRFL ESLPFAPTNA QSRVVAEIHA DMTKATPMMR LVQGDVGSGK TLVAALSALA AIENGCQVAL MAPTELLAEQ HAANFARWFE PLGLKVGWLA GKLKGKARTQ TLEDIASGAA QMIVGTHAIF QEQVSFSRLA LTIIDEQHRF GVHQRLGLRE KGIQQGFFPH QLIMTATPIP RTLAMTAYAD LDTSIIDELP PGRTPITTVA IPDTRRLDVI ERVRQAALQD KRQAYWVCTL IEESEVLECQ AAEDTAGGLK EALPELGIGL VHGRMKGAEK QAIMADFKAG KLDLLVATTV IEVGVDVPNA SLMIIENPER LGLAQLHQLR GRVGRGAVAS HCVLLYKAPL SFTAQARLGV LRESNDGFVI AQKDLELRGP GEVLGTRQTG LAQMKVADLV RDQALIPHIQ KLARHLMTQA PDNVDAIIER WLGGREQYVQ A
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