| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3370 |
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| Symbol | |
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| ID | 4605617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3997055 |
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| End bp | 3997573 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639782790 |
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| Product | type IV pilus biogenesis protein PilP |
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| Protein accession | YP_929242 |
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| Protein GI | 119776502 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3168] Tfp pilus assembly protein PilP |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0198252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAG TCTTGCCGTT AGCCACTATC TTACTGTTTT TGACAGGCTG TATTGGCGAT
CGTAGCGATT TGGAACTATT TGTTACTACA ACCAAAGCTC AGCACGTTGC CAAGATTCCA
CCGTTGAAAA AGCCACCTGC ATTTGAGCAT TTTGCTTATC AGGCGGAATT GCTCCGCAGT
CCCTTCGTTC CTCCCTCAAG GGAGCTGACC GAAGAAGCGG TGGATGCTTC CAAGGATTGT
ACTCAACCCG ATCTCAAGCG TCGTAAGGGA AGACTGGAAA CCTATGCATT GGATAATCTG
AAGATGCGGG GCACCTTGAC CCAGGACAAA CGCATTTGGG CATTGGTACA AACCAATGAT
GGCAATGTAT TCCGCTTGGG TGTGGGAGAC TATCTGGGGC TTTACCATGG CCGTATTAGT
AAAGTCACAC CACAAAATGT TGAAGTAATA GAATTAATTC CGGACGGTTC CGGCTGCTGG
GCAGAGCGCT CAAGCACCCT GGAATTGGCT GGAGAATAA
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| Protein sequence | MKRVLPLATI LLFLTGCIGD RSDLELFVTT TKAQHVAKIP PLKKPPAFEH FAYQAELLRS
PFVPPSRELT EEAVDASKDC TQPDLKRRKG RLETYALDNL KMRGTLTQDK RIWALVQTND
GNVFRLGVGD YLGLYHGRIS KVTPQNVEVI ELIPDGSGCW AERSSTLELA GE
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