Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3368 |
Symbol | aroK |
ID | 4605615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3994250 |
End bp | 3994765 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639782788 |
Product | shikimate kinase I |
Protein accession | YP_929240 |
Protein GI | 119776500 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000011554 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAA AACGAAATAT TTTTCTGGTA GGCCCTATGG GCGCGGGCAA GAGCACCATA GGCCGTCATC TGGCTCAAAT GCTGCACTTG GAATTCCATG ACTCTGACCA AGAAATTGAA AGCCGTACTG GGGCTGACAT TGCTTGGGTA TTTGATGTTG AAGGTGAAGA AGGTTTCCGT CGCCGCGAGG CGCAGGTGAT AGCCGACTTA ACCGAAAAGC AGGGTATTGT GCTGGCAACC GGTGGTGGTT CAGTACAAAG CAAAGATATA CGTAACTATC TGTCCGCAAG AGGGATTGTG GTATATCTCG AGACAACCAT AGATAAGCAG GTTGCTCGTA CCCAAAGAGA CAAACGTCGT CCACTTTTGC AGGTTGATGA TCCTCGTTCA GTGCTAGAGA CACTGGCCGA GAGCCGTAAT CCACTCTATG AAGAAATCGC TGATGTGATT GTCAAAACCG ATGACCAAAG TGCCAAGGTC GTTGCCAATC AAATCATCGA ACAGCTGGGA TTCTGA
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Protein sequence | MAEKRNIFLV GPMGAGKSTI GRHLAQMLHL EFHDSDQEIE SRTGADIAWV FDVEGEEGFR RREAQVIADL TEKQGIVLAT GGGSVQSKDI RNYLSARGIV VYLETTIDKQ VARTQRDKRR PLLQVDDPRS VLETLAESRN PLYEEIADVI VKTDDQSAKV VANQIIEQLG F
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