Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3365 |
Symbol | |
ID | 4605612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3990718 |
End bp | 3991560 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639782785 |
Product | site-specific DNA-methyltransferase (adenine-specific) |
Protein accession | YP_929237 |
Protein GI | 119776497 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0338] Site-specific DNA methylase |
TIGRFAM ID | [TIGR00571] DNA adenine methylase (dam) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCATGA AACAAAGGGC CTTTCTAAAA TGGGCCGGTG GCAAATTCAA GCTGATGGAC GACCTGCGTC GCCATTTGCC TGAAGGAAAA CGCCTGGTTG AACCCTTTGT TGGCGCAGGT TCGGTTTTTC TCAACACCCA ATACGATGCC TATCTACTTT GCGATATCAA TCAGGATTTG ATTGGCCTCT ATAAGATAGT TAAGGCGCAG CCCGAGGAGT ATATTCGTGC AGCCAGGGCG CTCTTTTGTG ATGAGATGAA TGCCAAAGAC GCCTACTACG ATATTCGTAG TCGCTTCAAT AAATCCAAAG ATCCCTTTAG CCGCGCCGTC TATTTCCTGT ACCTGAACCG TCATGGTTTC AATGGCTTGT GTCGTTACAA CCGTAAGGGT GAATTTAACG TTCCTTTCGG TTCTTACAAG AAGCCCTATT TTCCCGAGCA GGAAATCCGG GCCTTTTCTA TCAAGGCGCA GCGAGCCGAG TTTCGCTGTA TAAGTTACGA GCAGGCGTTT GAGCTTGCGA CCAGCGGCGA TGTGATTTAT TGCGACCCGC CCTATGCACC CTTATCGACT ACGGCAAGCT TTACCACCTA TGTGGGGGCG GGCTTTACTT TAGACGATCA GGCGTTGTTG GCCCGTCACT CACGTCACAT TGCTGTCGAG CGTGGCATAC CTGTGCTCAT CAGTAATCAC GATATCCCAT TGACCCGCGG TTTATACCTG GGCGCCAAAC TGGAAACGGT AAAGGTGCAG CGCAATATCA GCCAAAAAGG CAGTGGGCGA AATAAAGTGG ATGAACTGAT GGCGCTCTAT GATGAAACCT TTCATCTGGA AGCGCTGGAT TGA
|
Protein sequence | MTMKQRAFLK WAGGKFKLMD DLRRHLPEGK RLVEPFVGAG SVFLNTQYDA YLLCDINQDL IGLYKIVKAQ PEEYIRAARA LFCDEMNAKD AYYDIRSRFN KSKDPFSRAV YFLYLNRHGF NGLCRYNRKG EFNVPFGSYK KPYFPEQEIR AFSIKAQRAE FRCISYEQAF ELATSGDVIY CDPPYAPLST TASFTTYVGA GFTLDDQALL ARHSRHIAVE RGIPVLISNH DIPLTRGLYL GAKLETVKVQ RNISQKGSGR NKVDELMALY DETFHLEALD
|
| |