Gene Sama_3365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3365 
Symbol 
ID4605612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3990718 
End bp3991560 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content50% 
IMG OID639782785 
Productsite-specific DNA-methyltransferase (adenine-specific) 
Protein accessionYP_929237 
Protein GI119776497 
COG category[L] Replication, recombination and repair 
COG ID[COG0338] Site-specific DNA methylase 
TIGRFAM ID[TIGR00571] DNA adenine methylase (dam) 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGA AACAAAGGGC CTTTCTAAAA TGGGCCGGTG GCAAATTCAA GCTGATGGAC 
GACCTGCGTC GCCATTTGCC TGAAGGAAAA CGCCTGGTTG AACCCTTTGT TGGCGCAGGT
TCGGTTTTTC TCAACACCCA ATACGATGCC TATCTACTTT GCGATATCAA TCAGGATTTG
ATTGGCCTCT ATAAGATAGT TAAGGCGCAG CCCGAGGAGT ATATTCGTGC AGCCAGGGCG
CTCTTTTGTG ATGAGATGAA TGCCAAAGAC GCCTACTACG ATATTCGTAG TCGCTTCAAT
AAATCCAAAG ATCCCTTTAG CCGCGCCGTC TATTTCCTGT ACCTGAACCG TCATGGTTTC
AATGGCTTGT GTCGTTACAA CCGTAAGGGT GAATTTAACG TTCCTTTCGG TTCTTACAAG
AAGCCCTATT TTCCCGAGCA GGAAATCCGG GCCTTTTCTA TCAAGGCGCA GCGAGCCGAG
TTTCGCTGTA TAAGTTACGA GCAGGCGTTT GAGCTTGCGA CCAGCGGCGA TGTGATTTAT
TGCGACCCGC CCTATGCACC CTTATCGACT ACGGCAAGCT TTACCACCTA TGTGGGGGCG
GGCTTTACTT TAGACGATCA GGCGTTGTTG GCCCGTCACT CACGTCACAT TGCTGTCGAG
CGTGGCATAC CTGTGCTCAT CAGTAATCAC GATATCCCAT TGACCCGCGG TTTATACCTG
GGCGCCAAAC TGGAAACGGT AAAGGTGCAG CGCAATATCA GCCAAAAAGG CAGTGGGCGA
AATAAAGTGG ATGAACTGAT GGCGCTCTAT GATGAAACCT TTCATCTGGA AGCGCTGGAT
TGA
 
Protein sequence
MTMKQRAFLK WAGGKFKLMD DLRRHLPEGK RLVEPFVGAG SVFLNTQYDA YLLCDINQDL 
IGLYKIVKAQ PEEYIRAARA LFCDEMNAKD AYYDIRSRFN KSKDPFSRAV YFLYLNRHGF
NGLCRYNRKG EFNVPFGSYK KPYFPEQEIR AFSIKAQRAE FRCISYEQAF ELATSGDVIY
CDPPYAPLST TASFTTYVGA GFTLDDQALL ARHSRHIAVE RGIPVLISNH DIPLTRGLYL
GAKLETVKVQ RNISQKGSGR NKVDELMALY DETFHLEALD