| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3361 |
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| Symbol | |
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| ID | 4605608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3988559 |
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| End bp | 3989242 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639782781 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_929233 |
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| Protein GI | 119776493 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTGA TGAATCGTAT CCGTGCCATT GCTTTTGATT TGGATGGCAC CTTGGTTGAC
AGTGTGCCGG ATCTCGCCGC GGCCACCAAT GACACTCTTC GCGAGCTGAA TTTGCCCCAG
TGCACCGAAG CCGAAGTGCG GACATGGGTG GGGAATGGAG CCAGGGTCTT GATGGCTCGT
GCCCTGACCC ATGCACTCGG GCGCGATGTG ACCGGCTCTA TGCTCGACGA TGCCATGCCG
CTCTTTATGC GCCATTATGA ACGCCATTTG GAGTGTCACA GCCGTTTGTA TGATGGGGTT
ATCGAGACAC TCAACGAGCT TGCTGCCATG GGGATCCGCA TGGCTATCGT TACCAATAAA
CCCCACAGAT TCACCCTGCC ATTGCTCAGG GCGTTTGGCA TCGATGACCA TTTTGAGCTG
GTGCTCGGTG GTGATTCGCT GGAACGAATG AAACCTGATC CCCTGCCGTT GACTCACATT
TTGGACAGCT GGCAGCTCGG CCGTGACGAA CTCCTGATGG TGGGCGACAG CCGCAACGAT
ATACTGGCCG CCAAAGCGGC TGGAATTGCA TCCTTTGGCT TGACCTACGG CTACAACTAC
GGTGAAGATA TTGGGCTTTC TGGCCCAGAC GCCGTATGTA ACACCTTTGC AGATATCTTG
ACTCGCCTGA CGGCGACACA CTAA
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| Protein sequence | MTLMNRIRAI AFDLDGTLVD SVPDLAAATN DTLRELNLPQ CTEAEVRTWV GNGARVLMAR
ALTHALGRDV TGSMLDDAMP LFMRHYERHL ECHSRLYDGV IETLNELAAM GIRMAIVTNK
PHRFTLPLLR AFGIDDHFEL VLGGDSLERM KPDPLPLTHI LDSWQLGRDE LLMVGDSRND
ILAAKAAGIA SFGLTYGYNY GEDIGLSGPD AVCNTFADIL TRLTATH
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