| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3360 |
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| Symbol | |
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| ID | 4605607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3987548 |
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| End bp | 3988546 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639782780 |
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| Product | tryptophanyl-tRNA synthetase |
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| Protein accession | YP_929232 |
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| Protein GI | 119776492 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAAAC CCATCGTTCT CAGCGGCGCG CAGCCATCAG GCGAGTTGAC CATAGGCAAC
TACATGGGTG CACTGCGTCA GTGGGTGGCG ATGCAGGACA GTCATGATTG TCTTTATTGT
GTGGTGGATT TGCATGCCAT TACCGTGCGC CAGGATCCCA AGGCCCTGCG TGAGGCTTGC
CTTGACACTC TGGCGCTCTA CTTGGCCTGT GGTGTTGACC CGAAAAAGAG CACTGTGTTT
ATCCAGTCTC AGGTGCCACA GCATACTCAG CTTGGCTGGG TGCTCAACTG CTACACCCAG
ATGGGTGAGC TGTCGCGCAT GACTCAGTTT AAAGACAAGT CACAAAAGCA TGCCAACAAT
ATCAACGTTG GCCTGTTTGG CTACCCTGTA CTGATGGCAG CAGACATTCT TATCTATCAG
GCCAATCAAA TTCCCGTTGG TCAGGATCAG AAACAGCACC TTGAGCTGAC CCGCGATATC
GCGATTCGTT TCAACAACGC CTATGGCGAC ACCTTTACCG TGCCAGAGCC TTTCATCCCA
CCCGTGGGTG CCAAGGTGAT GTCACTGCAG GACCCGACCA AGAAGATGTC CAAGTCAGAT
GACAATCGCA ATAACGTGAT TGGTCTGTTG GAAGATCCCA AGGCGGTATT GAAAAAGCTC
AAGAAGGCCA TGACCGACAG TGATGAGCCG CCTGTGGTAC GTTTCGATGT AGACAACAAA
CCCGGCGTGT CCAACCTGCT TAGCCTGATG TCTGGTGTGA CAGGGCAGAG CATCGCTTCG
CTGGAAGCCG ATTTCGAAGG CAAGATGTAC GGCCATCTTA AGGTAGCCTG TGGCGAAGCC
GTTGTTGGCA TGCTGGAGCC GCTGCAGGAG CGATATCGTC AATTCCGTGA AGACAGGGCT
TACCTGGATA CAGTTATGCG TGACGGCGCC GAGAAGGCCC AGGCGCGTGC CGAAGTAACC
CTGAAACAGG TATACGAAAA AATCGGCCTC TTGGTATAA
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| Protein sequence | MTKPIVLSGA QPSGELTIGN YMGALRQWVA MQDSHDCLYC VVDLHAITVR QDPKALREAC
LDTLALYLAC GVDPKKSTVF IQSQVPQHTQ LGWVLNCYTQ MGELSRMTQF KDKSQKHANN
INVGLFGYPV LMAADILIYQ ANQIPVGQDQ KQHLELTRDI AIRFNNAYGD TFTVPEPFIP
PVGAKVMSLQ DPTKKMSKSD DNRNNVIGLL EDPKAVLKKL KKAMTDSDEP PVVRFDVDNK
PGVSNLLSLM SGVTGQSIAS LEADFEGKMY GHLKVACGEA VVGMLEPLQE RYRQFREDRA
YLDTVMRDGA EKAQARAEVT LKQVYEKIGL LV
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