Gene Sama_3355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3355 
Symbol 
ID4605602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3984026 
End bp3984352 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content54% 
IMG OID639782775 
Producthypothetical protein 
Protein accessionYP_929227 
Protein GI119776487 
COG category[L] Replication, recombination and repair 
COG ID[COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase 
TIGRFAM ID[TIGR00252] conserved hypothetical protein TIGR00252 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCCGG GCCAGCTCGC TGAAGACAGA GCAATGAAGC ACCTGTGCGC CCATGGGCTG 
AGGCTCGAGG CGCGCAATGT GCGTTACCCC TTTGGCGAGA TTGATTTAGT AATGCGGGAA
GGGCGCGTGT ACGTGTTTGT GGAAGTCAAA TTCCGTACCC CAAAAGGTTT TGGTGATGCG
GTGCAGGCGT TATCTGCCGC ACAGCAGCAA AGACTCAGGC GTGCGGCCAC CCATTACCTT
CAGTGCCATC GTATCGATGC CCCCTGCAGG TTCGATATGG TGGCCATTAC AGGGGATAAA
TTGGAATGGA TTAAAGATGC ATTTTGA
 
Protein sequence
MNPGQLAEDR AMKHLCAHGL RLEARNVRYP FGEIDLVMRE GRVYVFVEVK FRTPKGFGDA 
VQALSAAQQQ RLRRAATHYL QCHRIDAPCR FDMVAITGDK LEWIKDAF