Gene Sama_3339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3339 
Symbol 
ID4605586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3967640 
End bp3968233 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content58% 
IMG OID639782759 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_929211 
Protein GI119776471 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAATC CGCCAGTCAC CCTCAGTCAG TGCCTCAGCC AGCACCAGAG TAAAGCCGCT 
GAATTTGATG CCCAAAATTG CACAGTACGG CTGATCCGCG AGAAGGATGC CAACTCGGTT
GCAGACTACT TTGGCCGTAA TCGTGCCCAC TTTTTGCCCT GGGAGCCGCT GCGGGAGGCG
GACTACCACA GCGCCGCCCA GTGGCAGACA CGCATCAGGG CATCGCTGCT TGAGACGAGC
AATTGCTGCT ATCTGGTACT GGCCGACCCG GCGCATATTT ACGGCATGGC AACCCTCAGC
AATCAGGTGC GCGGCCCCTT TCAGGCCTGT TATTTGGGCT ATGGCATTGA CCAGTCGCTG
CAAGGTAAGG GATATGCCAC CCGGCTGTGT GAAGCCGCTC TCGCCTACGC CTTCGAAGAA
CTTACGTTGC ATCGGGTGAT GGCCAACTAC ATGCCATCCA ACCACAGATC CGCCGCCCTG
CTAAAGCGGC TCGGCTTTGA AAAAGAGGGC CTCGCCCGCG CCTACCTTCA AATCAACGGC
CAATGGGAAG ACCATGTGCT TACCGCAAAG CTTGCTCCCG GGTCAGCCCG TTAA
 
Protein sequence
MPNPPVTLSQ CLSQHQSKAA EFDAQNCTVR LIREKDANSV ADYFGRNRAH FLPWEPLREA 
DYHSAAQWQT RIRASLLETS NCCYLVLADP AHIYGMATLS NQVRGPFQAC YLGYGIDQSL
QGKGYATRLC EAALAYAFEE LTLHRVMANY MPSNHRSAAL LKRLGFEKEG LARAYLQING
QWEDHVLTAK LAPGSAR