Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3338 |
Symbol | |
ID | 4605585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3967080 |
End bp | 3967544 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639782758 |
Product | hypothetical protein |
Protein accession | YP_929210 |
Protein GI | 119776470 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2020] Putative protein-S-isoprenylcysteine methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAAGA TGATGGTTGC AGCACTGACC AGATACCCAC TGTTTTTGAT GTTGGGTCTG GCTGCAGCAG CTGGTATCGG CTTGTTGGAT GGCGAGCCCT GGCTGGCCGG AAACGGATTC TTGTTGCTGA TGGGAGCATC GCTTGGGCTG GCAGGCGCCT TATTGTTGTT AACCGCAGCG GGCCTCTTCA GGCGCGTTGG TACCACGGTA GACCCAACCA AGTCGCCGGA TGAGCTGGTT ACCCATGGCA TCTACGGGCT GACGCGTAAC CCAATGTATC TTGGGATGTT ATTGCTGCTG GTGGCCGAGG TGTGTTTGCT TGGGCGGCCA CTGACGCTGC TGTCACCACT GTGTTTTTTT GTGCTGATGA ACACCCAGCG TATTCCTGCC GAAGAAGCCA TGGTGGAGGC ACGTTTTGGT GCTGCCTTTA CCGAGTATAA GGTCAGGGTC AGGCGCTGGT TGTAG
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Protein sequence | MGKMMVAALT RYPLFLMLGL AAAAGIGLLD GEPWLAGNGF LLLMGASLGL AGALLLLTAA GLFRRVGTTV DPTKSPDELV THGIYGLTRN PMYLGMLLLL VAEVCLLGRP LTLLSPLCFF VLMNTQRIPA EEAMVEARFG AAFTEYKVRV RRWL
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