Gene Sama_3338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3338 
Symbol 
ID4605585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3967080 
End bp3967544 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content56% 
IMG OID639782758 
Producthypothetical protein 
Protein accessionYP_929210 
Protein GI119776470 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2020] Putative protein-S-isoprenylcysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAAGA TGATGGTTGC AGCACTGACC AGATACCCAC TGTTTTTGAT GTTGGGTCTG 
GCTGCAGCAG CTGGTATCGG CTTGTTGGAT GGCGAGCCCT GGCTGGCCGG AAACGGATTC
TTGTTGCTGA TGGGAGCATC GCTTGGGCTG GCAGGCGCCT TATTGTTGTT AACCGCAGCG
GGCCTCTTCA GGCGCGTTGG TACCACGGTA GACCCAACCA AGTCGCCGGA TGAGCTGGTT
ACCCATGGCA TCTACGGGCT GACGCGTAAC CCAATGTATC TTGGGATGTT ATTGCTGCTG
GTGGCCGAGG TGTGTTTGCT TGGGCGGCCA CTGACGCTGC TGTCACCACT GTGTTTTTTT
GTGCTGATGA ACACCCAGCG TATTCCTGCC GAAGAAGCCA TGGTGGAGGC ACGTTTTGGT
GCTGCCTTTA CCGAGTATAA GGTCAGGGTC AGGCGCTGGT TGTAG
 
Protein sequence
MGKMMVAALT RYPLFLMLGL AAAAGIGLLD GEPWLAGNGF LLLMGASLGL AGALLLLTAA 
GLFRRVGTTV DPTKSPDELV THGIYGLTRN PMYLGMLLLL VAEVCLLGRP LTLLSPLCFF
VLMNTQRIPA EEAMVEARFG AAFTEYKVRV RRWL