| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3336 |
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| Symbol | |
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| ID | 4605583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3964229 |
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| End bp | 3965383 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639782756 |
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| Product | outer membrane porin, putative |
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| Protein accession | YP_929208 |
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| Protein GI | 119776468 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT CACAATTGGC ACTCTTACTG CCACTGCTTA TTGGCGCCTC GTCCGTCAAT
GCCATGGAGC TATACAACGA CAACAAAAAC AGCCTCGGCC TCACCGGCTG GCTCGGTTTT
AACGCCCTCT ACGATGGCGA CGAAACTGCG GTGAACGACA ACCTGTCGCA GCTGCGCTTT
ACCTTCGAGC GGGAAGAGCG CAACGGCTGG CGTGCCTATG CGGTGACCGA ATGGGGCGTG
AATATCGTTT CAGGCAACGA AGATTTGGTC ATGCAGGGCG GCAAGCTGAA TGCGGAAAAG
AGCGGTGACT TCCTCAATAA CCGCCTGGGT TATGTGGGTC TGTCCCATGA CAATTACGGC
AGCCTGACTT TCGGCAAGCA GTGGGGCGCT TACTATGATG TGGCCGGCAC CACCGACCTG
CCCAACGTGT TTGCCGGTTA CAGCGTGGGC GCCTACGGCT TTGGTGATGG CGGCCTGACC
GGCACCGGCC GCGCCGACAG CGCCTTTTTG TACCGCAACA GCTTTGGCCC CGTCTCCATC
GCGTTGCAAT ACGCCGCCAA AAACAACGGC GATATCAGCG TGACCGACAG CGACGGCAAT
CAGATTGACG ATGCCGAGCT GAGTTTTGAC AACAGCTACG GCGCCTCCGT GACCTGGGCG
GTGACCGATA AATTCAGCCT GCTGGCGGGC ATGAATCGCG GTGACATTAA AGGCCATATT
GGCTCCAGCG AAATCGATGA AGCCAATCAA ATCATCGGCA TAGGCGCCAT GTACGGCAGT
TACTACCATT ATGCCGATGA GCGCAAGGCC GACGGTCTTT ACCTGGGTTT CAATGCCCAC
AAGAGTGAAA ACAACGAGCA GGTAAATGGC GATTTGTACG ATGCCACCGG CGCCGAGCTG
ATGCTGGCAT GGCAGGCCGA TAACGGCTTT GTGCCCATGG CAGTGCTGAC GTATCTCGAT
TTGGACACAG ATGAGAGTAC CCCCATCACC GGTAACTGGA CCCGCCGCTT CGCCATGGTG
GGGCTGCACT ACAGATACAG CCTGGATACT GTGATGTTTT TCGAAGCCAA ACTCGACTTC
TCCGACATGG ACGACAAGTC GCTGGAAGCG CTGGAAGACA ACCAGTTTGC GGTGGGCATT
AACTACTTTT TCTGA
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| Protein sequence | MKKSQLALLL PLLIGASSVN AMELYNDNKN SLGLTGWLGF NALYDGDETA VNDNLSQLRF
TFEREERNGW RAYAVTEWGV NIVSGNEDLV MQGGKLNAEK SGDFLNNRLG YVGLSHDNYG
SLTFGKQWGA YYDVAGTTDL PNVFAGYSVG AYGFGDGGLT GTGRADSAFL YRNSFGPVSI
ALQYAAKNNG DISVTDSDGN QIDDAELSFD NSYGASVTWA VTDKFSLLAG MNRGDIKGHI
GSSEIDEANQ IIGIGAMYGS YYHYADERKA DGLYLGFNAH KSENNEQVNG DLYDATGAEL
MLAWQADNGF VPMAVLTYLD LDTDESTPIT GNWTRRFAMV GLHYRYSLDT VMFFEAKLDF
SDMDDKSLEA LEDNQFAVGI NYFF
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