Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3326 |
Symbol | |
ID | 4605573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 3953446 |
End bp | 3953835 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639782746 |
Product | hypothetical protein |
Protein accession | YP_929198 |
Protein GI | 119776458 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00885978 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGAGT CCTTCAGCTT GAGCGGTAAT CTGGGACGGG AATTTGCCAC CATTTGTGCC ATGGTCGCCA TCTATTGCCG GGACCATCAT GGCGGCAAAA CACCCTGTAC CGAGTGTCAG GCCTTTATGG AATACGCCAA GACCCGGCTG GACCGCTGCC CCTACGGCCA GGAAAAACCC ACCTGCAACA AGTGCCCAGT GCATTGCTAC AAGCCAGAGC CCCGGGAGCT GGCGCGCCAA ATCATGCGTT ATGCTGGCCC CAGAATGTTA CTGCCCCACC CTATCATGGC GATACGGCAC CTGTTGCTGG AGCGTAAACC CGCCCCCGAA AAGCCACCCA AAAATCTTTC AAACCGACAT TTGCGGTTAC AAAAAGCCGC ATCAGAATAA
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Protein sequence | MSESFSLSGN LGREFATICA MVAIYCRDHH GGKTPCTECQ AFMEYAKTRL DRCPYGQEKP TCNKCPVHCY KPEPRELARQ IMRYAGPRML LPHPIMAIRH LLLERKPAPE KPPKNLSNRH LRLQKAASE
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