Gene Sama_3326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3326 
Symbol 
ID4605573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3953446 
End bp3953835 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content55% 
IMG OID639782746 
Producthypothetical protein 
Protein accessionYP_929198 
Protein GI119776458 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00885978 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAGT CCTTCAGCTT GAGCGGTAAT CTGGGACGGG AATTTGCCAC CATTTGTGCC 
ATGGTCGCCA TCTATTGCCG GGACCATCAT GGCGGCAAAA CACCCTGTAC CGAGTGTCAG
GCCTTTATGG AATACGCCAA GACCCGGCTG GACCGCTGCC CCTACGGCCA GGAAAAACCC
ACCTGCAACA AGTGCCCAGT GCATTGCTAC AAGCCAGAGC CCCGGGAGCT GGCGCGCCAA
ATCATGCGTT ATGCTGGCCC CAGAATGTTA CTGCCCCACC CTATCATGGC GATACGGCAC
CTGTTGCTGG AGCGTAAACC CGCCCCCGAA AAGCCACCCA AAAATCTTTC AAACCGACAT
TTGCGGTTAC AAAAAGCCGC ATCAGAATAA
 
Protein sequence
MSESFSLSGN LGREFATICA MVAIYCRDHH GGKTPCTECQ AFMEYAKTRL DRCPYGQEKP 
TCNKCPVHCY KPEPRELARQ IMRYAGPRML LPHPIMAIRH LLLERKPAPE KPPKNLSNRH
LRLQKAASE