| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3317 |
|---|
| Symbol | |
|---|
| ID | 4605564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 3947088 |
|---|
| End bp | 3947441 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639782737 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_929189 |
|---|
| Protein GI | 119776449 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCA TTCGAATGGA TACAGGCGCT CGCATGAGCA GCATTGTGAT ACATCAGGGC
ACAGTGTACC TCTGTGGTCA GGTGGCCAAA GACAAGCTGA CCGACATCCG CACCCAGACC
CAAACCATGC TGGAAGAAGT GGACACCCTG CTGAGCCAGG CGGGCAGCAG CCGTGAGCAT
CTGCTGAGCT GCACCATCTA TCTGAAAAAT ATGGCCGACT ACGATGCCAT GAATGAAGTG
TGGGATGCCT GGGTACCCAA AGGGCATGCC CCGGCAAGGG CCTGTGTGGA AGCCGCCATC
GCCGAGCCCG AGTATCTGGT AGAAATTTCT GTGGTCGCGG CCCAGAAGGC CTGA
|
|---|
| Protein sequence | MSIIRMDTGA RMSSIVIHQG TVYLCGQVAK DKLTDIRTQT QTMLEEVDTL LSQAGSSREH
LLSCTIYLKN MADYDAMNEV WDAWVPKGHA PARACVEAAI AEPEYLVEIS VVAAQKA
|
|---|
| |