Gene Sama_3314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3314 
Symbol 
ID4605561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3944545 
End bp3945894 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content59% 
IMG OID639782734 
Productphospholipase 
Protein accessionYP_929186 
Protein GI119776446 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACTGG TGATGGTGCA TGGCTGGAGC GTCACAGATA CCCGGGTGTA TGGGGGCTTG 
CCTGAGGCGC TGGCTCGCTT TGCCCCTGAA TCGCTGGCGC TGGATATCGA GCACATCTTT
CTGGGCCGCT ATATCAGCTT CAATGACGAG GTGCGCATTA CGGATGTGGC GGATGCGTTC
GAGCGCGCGA GGCAGGAGCG TTTGCAGGAT GAACGCTTTG CCGTAGTGAC CCATTCCACC
GGCGCGCCGG TTATCCGCAC CTGGCTTGCC CGCTACTATG CTGCATTGCC TCAGGGCGAG
CAGGGGCAAA AGGCACTGAA CCAATGTCCG CTGAGCCACC TGATTATGCT TGCCCCCGCC
AACCATGGCT CGGCACTGGC GCAGCTGGGT AAATCCCGCC TTGGGCGGCT CAAATCCTGG
TTTGATGGGG TAGAGCCGGG GCAGCAAATC CTCGACTGGC TGGAGCTGGG CAGCCAGGGG
CAACATCAAC TGAGCCGCTA CTGGCTCAGC CAGAACCCCG TGGCCGATGG TCTGTATCCC
TTTGTGATAA GTGGCGAAAC CATCGACAGT AACCTCTATG ACTTCCTCAA CAGTTACACT
GCCGAGCCGG GCAGCGATGG TGTCGTTCGC CTCGCCGGCG CCAATCTCAA CTATCGCAGC
CTTGAACTTG CCGAAACCCC AACCCTGGAC GATACCGGCC GGGCTGAGCT GTCCATCACG
GCCGATGTCA TGGCGCCCGC CTGTGGCTTT GAAGTGCTGC CAAGGGCCAG CCACAGCGGC
AACAAGCTTG GGATCATGAC CTCGGTCAAT GGTCGCTCGC CAAAGCCCAA ACCTGTGGTC
AGCCGTATCC TGCAATGTTT GCAGGTGGGG TCGGCCGGGG ATTACAGCGC CCTTTGCCAG
AAAATGGCTG ACAGCCGCCC CAGAACCGGC CCGCGCTTTA CCCAACTGGT GGTGCGGCTG
TGGGACAACG AAGGTGAGCC CATCCGCGAC TTCGATTTTT TGCTGCTGGC AGGGCCTGAC
TACGACCCCG GTAAGCTGCC TAAAGGCTTT TTTCAGGACA GACAAAAAAA TCAGCGCAGT
GGCAATGCCC TGACCCTCTA CCTGAACCAT GACCGCATGC TGAAAACCGC CCAAGGCTGC
TGGGGTTTTC GCATTATTCC CCGCCCGGAC AGGGGGCTTG CTCACTATCG GCAAGTGGAG
TTTCGCTGCG CCGGACACCT TGCCGACTAC CTTGTGGCCG ACCAGACCCT GATGTTGGAT
GTGCACCTGA CACGGCATCT TCATCCCCAT GTATTCAGCC TGACCGGTGC AAATGAACAG
GGGGACTTCA GACAGCTGGC AGAGGTTTAA
 
Protein sequence
MKLVMVHGWS VTDTRVYGGL PEALARFAPE SLALDIEHIF LGRYISFNDE VRITDVADAF 
ERARQERLQD ERFAVVTHST GAPVIRTWLA RYYAALPQGE QGQKALNQCP LSHLIMLAPA
NHGSALAQLG KSRLGRLKSW FDGVEPGQQI LDWLELGSQG QHQLSRYWLS QNPVADGLYP
FVISGETIDS NLYDFLNSYT AEPGSDGVVR LAGANLNYRS LELAETPTLD DTGRAELSIT
ADVMAPACGF EVLPRASHSG NKLGIMTSVN GRSPKPKPVV SRILQCLQVG SAGDYSALCQ
KMADSRPRTG PRFTQLVVRL WDNEGEPIRD FDFLLLAGPD YDPGKLPKGF FQDRQKNQRS
GNALTLYLNH DRMLKTAQGC WGFRIIPRPD RGLAHYRQVE FRCAGHLADY LVADQTLMLD
VHLTRHLHPH VFSLTGANEQ GDFRQLAEV