| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3313 |
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| Symbol | |
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| ID | 4605560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3942818 |
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| End bp | 3944362 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639782733 |
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| Product | cold-active alkaline serine protease |
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| Protein accession | YP_929185 |
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| Protein GI | 119776445 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1404] Subtilisin-like serine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCCA TTTACAAACC ACTGGCCGCG GCTGTGACTC TGGCGCTTTG TTCTGGCGCT
TATGCTGCCG AACAAGAGCG CTATATCGTT AAGTTTAAAG AAGGCAAGGG CCCGAGCGTG
ATGGCTCAGC TGAAGTCTCA GGGTGGCAAG ATGGCGCTGG ATCTGAGCAG CCACAATGCC
GCTGCCTTTA CCCTGCCAGC CAAGGCCCTG AAAGGCCTCG AAAACAATCC CAACGTGGAA
TACGTTGAAG TGGATGCCAA GCGCTATCCT CTGGGTCAGG TTGTGCCTTA CGGTATCCCC
ATGGTGCAGG CCGATCTGCT GAGCGACGCC GCCACCTCCA ACACCACAGT GTGTATCATC
GACTCTGGTT ATGAGCTGGC CCACGAAGAT CTGGCCGGTA ACCAGGTAAC AGGCACCAAC
GATGCCGGCA CCGGCAACTG GTTCACCGAC GAAAATCACC ACGGTACCCA CGTGGCAGGT
ACCATCGCCG CCCTGAACAA CAACACAGGC GTGGTGGGTG TCAACCCCAA CGGCAACCTC
AACCTGCACA TCATCAAGGT ATTCAATGCC GATGGTTGGG GCTACTCTTC TTCTCTGGTG
TCGGCGCTGA ACAAGTGTGA GCAGGCCGGT GCCAAGGTAA TCAACATGAG CCTGGGTGGC
AGCCGTTCAA GCCGCACCGA AGACTCGGCC TTTGCCGCCG CTGAAAGCCG TGGCGTACTG
TCTATCGCTG CTGCCGGTAA CGATGGCAAC ACCCGTCACT CTTACCCAGC CTCTTACAAC
TCTGTGGTAT CTGTTGCTGC CATCGACAGC AACAAGGTGG TTGCCGACTT CTCCCAAAAG
ACCAGCCAGG TTGAACTCTC TGGTCCTGGC GTAGGCGTGC TCTCTTCTGT GCCAACCGGC
ACGGCTCTGG TTGCCAGCAC CACAGTGGCT GGCACAGGTT ATGAAGCCAT AGGCATGGAA
GGTTCACCCA CTGGCGATGC CTCTGGCATG TTGGCCGACT GCGGTACCGG CGAGACAGCC
TGTAACGCCA ATGGTCAGGT GTGCCTTATC CAGCGCGGCG TGATCTCCTT CGCCGAGAAG
GTGCAGGCCT GTGAAAACGG CGGCGGTGTT GCGGCCATCA TCTACAACAA CGTATCCGGT
GCCCTGAACG GCACCATGGG CGGCGTGGCC ACCTCTATCC CATCTGTGGG TGTGAGTGAC
GTAGACGGCG CGGCCATGCT GGCTCAGGTG GGCAGCAACG CCAGCGTCAG CATCGGCGCC
GGTAACTATG CCTACTTCGA CGGCACCTCC ATGGCCACCC CACACGTAGC CGGTGTGGCT
GCGCTGGTAT GGAGCCATTT CCCTCAGTGT TCCAACACCC AAATCCGTGC GGCGCTGCGT
GCCACTGCCG AAGATCTGGG CGTAGCCGGT CGTGATGATT CCTACGGTTA TGGTCTGGTG
AAAGCCAAAG ACGCCGTGGA TTACCTGACC ACCTATGGCT GCGACGGTCA GAGCAGCGGC
GGCGGCAATA CAGGCGGTAC CTGTAAGGGC CGTAACTGTA AGTAA
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| Protein sequence | MQSIYKPLAA AVTLALCSGA YAAEQERYIV KFKEGKGPSV MAQLKSQGGK MALDLSSHNA
AAFTLPAKAL KGLENNPNVE YVEVDAKRYP LGQVVPYGIP MVQADLLSDA ATSNTTVCII
DSGYELAHED LAGNQVTGTN DAGTGNWFTD ENHHGTHVAG TIAALNNNTG VVGVNPNGNL
NLHIIKVFNA DGWGYSSSLV SALNKCEQAG AKVINMSLGG SRSSRTEDSA FAAAESRGVL
SIAAAGNDGN TRHSYPASYN SVVSVAAIDS NKVVADFSQK TSQVELSGPG VGVLSSVPTG
TALVASTTVA GTGYEAIGME GSPTGDASGM LADCGTGETA CNANGQVCLI QRGVISFAEK
VQACENGGGV AAIIYNNVSG ALNGTMGGVA TSIPSVGVSD VDGAAMLAQV GSNASVSIGA
GNYAYFDGTS MATPHVAGVA ALVWSHFPQC SNTQIRAALR ATAEDLGVAG RDDSYGYGLV
KAKDAVDYLT TYGCDGQSSG GGNTGGTCKG RNCK
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