Gene Sama_3311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3311 
Symbol 
ID4605558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3940525 
End bp3941976 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content61% 
IMG OID639782731 
Producthypothetical protein 
Protein accessionYP_929183 
Protein GI119776443 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.694942 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGGT CTATCAGAAT ACAACTTGTG TCGGCCCTGA TGTGTTTGCC CCTGTTTTCC 
GGCTGCACCT CGGTGGCCCA GGCTGAGCCG AGTGAATACA GCAGCAGTAT CCGCGCCGAG
CGCTTCAGCG AAGCTGAGCT GGCACGGCTG CTGGCACCCA TTGCCCTTTA CCCAGATACC
CTGCTGACCC ATATCCTGAT TGCCTCCAGC TATCCGCTGG AAGTGGTGGA AGCCCAACGC
TGGCGCGAGA AAAATCGCAA GCTTGGCGAT AAGAAGCTGA TGGATAAGGC CGAGAAGCAG
GGCTGGGATC CCAGCGTCAC CGCGCTGATT GCCTTCCCCA ATGTGCTGGA GCGCATGAGT
GATGACCTCA ACTGGACACG GGATCTGGGG GATGCCTTCC TCGCCGATGA AGAGGCGGTG
CTGGACAGCA TACAGATGCT GCGCCGGGAG GCCGACCGCG CCGGTAATCT GGACGGCGGC
GATAATCTGG TGGTGAAACG CCAGCCGACG CAAATCATTA TCGAGTCGCC CAGCCCTGAA
ATCATCTATG TGCCTTACTA CGACCCACGC GTGGTGTATG GTCACTGGCG CTGGAACCGC
TATCCACCTG TGTACTGGGC GCCCTTCCCC GGCTATGTGA GCTACCATCG TCACTTTGGC
TGGCATTCGG GTATCAGCAT CTCCTTTAAC TTTTACTTTT CCAATTTCCA TTGGTACGAC
AGACACGTGA TAGTGCATCA CCATCATCAC TATCGCCGCC CACCGGAGCC AAGGTACGCC
ATCAGCCAGG GCGCCCAGCG CTGGCGCCAT GACCCGGGCC ATCGCCACGG TGTGGCCTAC
CGCAGCGCCG ATGTCCGTCA GCGCTTTAAT GTGAGCACGC CCAGCCGGAT TGAGCGCGAC
CACAGACGCC ATGATGAGTA CAGCCGCGTT GTGTCGCAGC AGCACAATCC ACAGGTACGC
TCACGTGAGC TCAGCCAAAG CCGCGAGCAG GAGTTCAAGG CCCGTATGAA CAGCAGCGAA
CGCCGCTTTG AAAACAATGG CAACAGTTCC CGTGAACGGG ACGTGGGCAA TAGCTCCCGC
GAGCGGGACA TGGGCCATCA ATCCCATGAC CGTGAGTTGC GTCAGCAGCT GAACAGCCGT
GAGCGGGCAG ACAGCCGTGA GCGCATGGAC AATCGTGAAC GCATGGAGAG CCGTGAGCGC
AGCCAGCCGC AACAGCGTGG ATTCGAGCAG CGCGAACCGC AGCGCGAGCG CCAGCAGTTC
CAGGAGCGTC AACGTGATGC TCAGCCAGCC CAGCCACGGG AGCAACAAGT CCAGCGTGAA
CGCCAGCGCG AGGCGCAGCA CGATGCCCGC CAGCAACGTC AACAGCCCCG CGAGCATCAG
CAGCCCCAGC GGGAACGCCC TCAGCCACAG CGCGAGCGTC ACAACGACCA TCCCCGCGAG
CGCAACCTCT AA
 
Protein sequence
MNRSIRIQLV SALMCLPLFS GCTSVAQAEP SEYSSSIRAE RFSEAELARL LAPIALYPDT 
LLTHILIASS YPLEVVEAQR WREKNRKLGD KKLMDKAEKQ GWDPSVTALI AFPNVLERMS
DDLNWTRDLG DAFLADEEAV LDSIQMLRRE ADRAGNLDGG DNLVVKRQPT QIIIESPSPE
IIYVPYYDPR VVYGHWRWNR YPPVYWAPFP GYVSYHRHFG WHSGISISFN FYFSNFHWYD
RHVIVHHHHH YRRPPEPRYA ISQGAQRWRH DPGHRHGVAY RSADVRQRFN VSTPSRIERD
HRRHDEYSRV VSQQHNPQVR SRELSQSREQ EFKARMNSSE RRFENNGNSS RERDVGNSSR
ERDMGHQSHD RELRQQLNSR ERADSRERMD NRERMESRER SQPQQRGFEQ REPQRERQQF
QERQRDAQPA QPREQQVQRE RQREAQHDAR QQRQQPREHQ QPQRERPQPQ RERHNDHPRE
RNL