Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3311 |
Symbol | |
ID | 4605558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 3940525 |
End bp | 3941976 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639782731 |
Product | hypothetical protein |
Protein accession | YP_929183 |
Protein GI | 119776443 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.694942 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACAGGT CTATCAGAAT ACAACTTGTG TCGGCCCTGA TGTGTTTGCC CCTGTTTTCC GGCTGCACCT CGGTGGCCCA GGCTGAGCCG AGTGAATACA GCAGCAGTAT CCGCGCCGAG CGCTTCAGCG AAGCTGAGCT GGCACGGCTG CTGGCACCCA TTGCCCTTTA CCCAGATACC CTGCTGACCC ATATCCTGAT TGCCTCCAGC TATCCGCTGG AAGTGGTGGA AGCCCAACGC TGGCGCGAGA AAAATCGCAA GCTTGGCGAT AAGAAGCTGA TGGATAAGGC CGAGAAGCAG GGCTGGGATC CCAGCGTCAC CGCGCTGATT GCCTTCCCCA ATGTGCTGGA GCGCATGAGT GATGACCTCA ACTGGACACG GGATCTGGGG GATGCCTTCC TCGCCGATGA AGAGGCGGTG CTGGACAGCA TACAGATGCT GCGCCGGGAG GCCGACCGCG CCGGTAATCT GGACGGCGGC GATAATCTGG TGGTGAAACG CCAGCCGACG CAAATCATTA TCGAGTCGCC CAGCCCTGAA ATCATCTATG TGCCTTACTA CGACCCACGC GTGGTGTATG GTCACTGGCG CTGGAACCGC TATCCACCTG TGTACTGGGC GCCCTTCCCC GGCTATGTGA GCTACCATCG TCACTTTGGC TGGCATTCGG GTATCAGCAT CTCCTTTAAC TTTTACTTTT CCAATTTCCA TTGGTACGAC AGACACGTGA TAGTGCATCA CCATCATCAC TATCGCCGCC CACCGGAGCC AAGGTACGCC ATCAGCCAGG GCGCCCAGCG CTGGCGCCAT GACCCGGGCC ATCGCCACGG TGTGGCCTAC CGCAGCGCCG ATGTCCGTCA GCGCTTTAAT GTGAGCACGC CCAGCCGGAT TGAGCGCGAC CACAGACGCC ATGATGAGTA CAGCCGCGTT GTGTCGCAGC AGCACAATCC ACAGGTACGC TCACGTGAGC TCAGCCAAAG CCGCGAGCAG GAGTTCAAGG CCCGTATGAA CAGCAGCGAA CGCCGCTTTG AAAACAATGG CAACAGTTCC CGTGAACGGG ACGTGGGCAA TAGCTCCCGC GAGCGGGACA TGGGCCATCA ATCCCATGAC CGTGAGTTGC GTCAGCAGCT GAACAGCCGT GAGCGGGCAG ACAGCCGTGA GCGCATGGAC AATCGTGAAC GCATGGAGAG CCGTGAGCGC AGCCAGCCGC AACAGCGTGG ATTCGAGCAG CGCGAACCGC AGCGCGAGCG CCAGCAGTTC CAGGAGCGTC AACGTGATGC TCAGCCAGCC CAGCCACGGG AGCAACAAGT CCAGCGTGAA CGCCAGCGCG AGGCGCAGCA CGATGCCCGC CAGCAACGTC AACAGCCCCG CGAGCATCAG CAGCCCCAGC GGGAACGCCC TCAGCCACAG CGCGAGCGTC ACAACGACCA TCCCCGCGAG CGCAACCTCT AA
|
Protein sequence | MNRSIRIQLV SALMCLPLFS GCTSVAQAEP SEYSSSIRAE RFSEAELARL LAPIALYPDT LLTHILIASS YPLEVVEAQR WREKNRKLGD KKLMDKAEKQ GWDPSVTALI AFPNVLERMS DDLNWTRDLG DAFLADEEAV LDSIQMLRRE ADRAGNLDGG DNLVVKRQPT QIIIESPSPE IIYVPYYDPR VVYGHWRWNR YPPVYWAPFP GYVSYHRHFG WHSGISISFN FYFSNFHWYD RHVIVHHHHH YRRPPEPRYA ISQGAQRWRH DPGHRHGVAY RSADVRQRFN VSTPSRIERD HRRHDEYSRV VSQQHNPQVR SRELSQSREQ EFKARMNSSE RRFENNGNSS RERDVGNSSR ERDMGHQSHD RELRQQLNSR ERADSRERMD NRERMESRER SQPQQRGFEQ REPQRERQQF QERQRDAQPA QPREQQVQRE RQREAQHDAR QQRQQPREHQ QPQRERPQPQ RERHNDHPRE RNL
|
| |