| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3306 |
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| Symbol | |
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| ID | 4605553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3932542 |
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| End bp | 3934530 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 639782726 |
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| Product | hypothetical protein |
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| Protein accession | YP_929178 |
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| Protein GI | 119776438 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3972] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000532342 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.261438 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGGTT ACTGCTTTTT TGCACCGGAG ACACAAGAAT TAGCCGAGAA AGCTGGCATC
AAAGAAAAAA TAGAGGATTA TGCTGAAGCT CAAAGAAAGC AGACATATGT TTTAGTTAAA
CCGTTATCTA AAGACGATTC AGAATATGAT TATGAATGTG CTGTAGTAAT ATTTTCATCA
GGTTCTAGAC CTTGCTTTAT TGATCTGGAC GATAATAAAG ATAAATTTGA TGATTATATT
GAAGACTTCT TTGATGATAT TTCATTTTTG TCTGAAAAAT TTAAATATAG GACAAAAATA
GGAAGAAAAA AACATTGGAT CGATTTATTT GATTGTTGTA CAGCTGATGA GTTGGATTTA
GCTTCTTTAA GTTTAGAAAA ACCATCAGAA AAAAGAGTTT CAGATCTATT AACCTCTTTG
GTTATAGGTA GTGTTAACGA TGTTGATAAA ATTAACATCG AAGCAGAAAG TCTTTTAGAG
TTGGTAAAGT CAAAAATTGT TTTGTTTGAC ACGGATCAAA CTGGTTTTGT ATTTAAATCC
AATGCTGGGA AAAAATATGT GATTCAAGGT TTAGCTGGTT CAGGTAAAAC TGAATTACTA
TTGCATAAGT TAAAGGAAAT ATATTCTTCA GAACAAGATG CTCGTATAGC ATTTACTTGC
TACAATAAAA TATTGGCATC ATCAATGAAA AGTAGAATTC CAGATTTTTT TGACTTTATG
AGAGTTGAGC GTCAAATTGA TTGGGATAAT AAACTATTCT GCTTCCATGC ATGGGGAAGT
TCAAGAGATC CTTATTCTGG AATGTATAGA TATATATGTC ATAGCTATGG CATACCTTTT
GGTAATATGC AAGCAGGAAG TTTTGAATAT TTATGTGAGA AAGCTATTGA AGAAATTAAG
TCAATTCCTT CATCAGAATT TGAATTCATT TTCGATTATG TATTCATTGA TGAAAGCCAA
GACTTCTCTG AGAGTTTTAT AGATTTATGC GATCTTGTAA CTGAAAAGAA ACTTTTTGTC
GCAGGTGATG TCTTTCAGAA TATATTTAGA CCAATTGATG CATCTGTTGC TCGTTCAGAT
TTAGTTCTTA AAAAATGCTA TCGGACAGAT CCTCGGAACC TAATGTTTTC CCATGCTTTA
GGAATGGGTT TATATGAACA GCCAGTATTA AGATGGTTAA AGCCTCATGA GTGGGAAGCT
TGCGGCTACA ATTATACAGT GCAAAAAAAT AATAGGGCTA TTGTAAATAG AGATCCATTA
AGAAGATTTG AAGATATGCC TGATGACTTT AGCTCTACTT ATATACATAC TATTAGAAAC
AGAGAGTCAA TTTCTCTTTC AATTTTCGAA GTGATACAAG AAATTATTGG TCGGCATGAA
ACGATAGCTG AAGGGGATAT AGCAGTAATT TTTTTAGACT CACAAAAGTA TATTTATGAT
GCTATCTCAC AATTAAAGAG CCTAGTTGCA GCTAGACTGG GTTGGAAAGC AAATGTTTCA
TTTGAAACCA AAAGAAGCGA TCCTGATAGA TTTTTTATTT CAAATATTAA TAATGCAAAA
GGATTAGAGT TTCCATTTGT TATCTGTTTT TCATTAGATC TTCATAGAAC AAGAACTTTC
CGTAATGCGC TTTACACAAT GATGGCTAGA TCCTTTTTAG AAAGCCATTT AGTTGTAAAT
GAGTTATACA ATGCTGAACT TGTAAAAGTA TTGAATGATG GACTTGACTG TATAAACACA
AATGGATATA TGGATATTAG AATTCCACCA GATGATGAGA TCGCTAATCA AGACGATTTG
ATTATTTGGG AGGATAAATT ATCAATAGAA GATTATGTGA GAAGTTGGTG TAAGGAAAGA
AAAGCAACTC CAAGATTAGT TGGTAAATTA ATAAACAGAA TTACAACGAT TACGGGTGAT
GATGACTATG ATCAGGGTTA TTTAGATTCA CTTCTACAGC TTGAATATGA AAGGAATGTC
AAGTTATGA
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| Protein sequence | MSGYCFFAPE TQELAEKAGI KEKIEDYAEA QRKQTYVLVK PLSKDDSEYD YECAVVIFSS
GSRPCFIDLD DNKDKFDDYI EDFFDDISFL SEKFKYRTKI GRKKHWIDLF DCCTADELDL
ASLSLEKPSE KRVSDLLTSL VIGSVNDVDK INIEAESLLE LVKSKIVLFD TDQTGFVFKS
NAGKKYVIQG LAGSGKTELL LHKLKEIYSS EQDARIAFTC YNKILASSMK SRIPDFFDFM
RVERQIDWDN KLFCFHAWGS SRDPYSGMYR YICHSYGIPF GNMQAGSFEY LCEKAIEEIK
SIPSSEFEFI FDYVFIDESQ DFSESFIDLC DLVTEKKLFV AGDVFQNIFR PIDASVARSD
LVLKKCYRTD PRNLMFSHAL GMGLYEQPVL RWLKPHEWEA CGYNYTVQKN NRAIVNRDPL
RRFEDMPDDF SSTYIHTIRN RESISLSIFE VIQEIIGRHE TIAEGDIAVI FLDSQKYIYD
AISQLKSLVA ARLGWKANVS FETKRSDPDR FFISNINNAK GLEFPFVICF SLDLHRTRTF
RNALYTMMAR SFLESHLVVN ELYNAELVKV LNDGLDCINT NGYMDIRIPP DDEIANQDDL
IIWEDKLSIE DYVRSWCKER KATPRLVGKL INRITTITGD DDYDQGYLDS LLQLEYERNV
KL
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