| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3300 |
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| Symbol | |
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| ID | 4605547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3926693 |
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| End bp | 3927862 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639782720 |
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| Product | acyl-CoA transferase/carnitine dehydratase |
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| Protein accession | YP_929172 |
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| Protein GI | 119776432 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.217224 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAC CGCTCAAAGG CCTGCGGGTA TTGGATCTCT CCCGGGTGCT GGCCGGTCCC
TGGTGCAGCC AGTTACTGGC CGATATGGGT GCCGAGGTTA TCAAGATTGA ACATCCGGAC
GGTGGCGACG ATACCCGCCA CTGGGGCCCG CCCTATGCAG GGGGCCACAC ACAGGGGGAT
GCCGCCTACT TCCTTGCCGC CAACCGGGGC AAAAAATCCC TGCTGCTGGA TTTGAAAAAT
CCTCATGATG TGGCACAAAT TCAAAAGCTT GCCCGCCACA GCGACATACT GCTGGAAAAC
TTCAAAGTGG GTGGGCTGGC AAAATACGGC CTGGATTATG GCAGCCTCAA GGCCATGAAC
CCCCAACTGG TGTATTGCTC AATCACCGGC TTTGGCCAGA GCGGCCCGGA CGCACCCCGC
GCAGGCTACG ACTTTATGAT CCAGGCCATG GGTGGCCTGA TGAGCCTCAC CGGCGCGGCT
GATGATGGCG GCGAGCCCAT GAAAACCGGC GTTGCCATTA CCGACCTCTT TACCGGGCTT
TATGCCGCCA ATGCCATTCT GGCGGCCATA GTGGCGCGCC AGTCCACGGG CCTTGGCTGC
CATATCGATA TGGCGCTGTT CGATGTACAG CTCGCCATGC TGGCCAATCA GGCGCAAAAC
TTCCTCGCCA GCGGCCAAAA TCCACCCCGG CTTGGCAATG CCCACCCTAA TATCGTGCCC
TATCAGGCCT TTGCCTGCGC CGATGGCCAC CTGATTTTGG CCGTGGGCAA CGATGGCCAG
TTTGCCCGTT TCTGCGAGCT GGCAGGATTG CACGAACTGC CCCATGACAG CCGCTTTGCC
ACCAATGCCG GGCGGGTAAG GCACCGCGAA ACCCTGTTGC CACTGATAAA GGCCGCCATG
CTGACCAAAT CCAAGGGCGA GTGGCTGGCG CTTTTGAACG ATGCCGGGGT GCCCGCCGGG
CCCATCAATA CTGTGTCTGA AGCCCTTGAT GAGCCCCAGG CCCAACACCG GCAAATGCAA
ATCGAGCGGG ACTTTAACGG CGAAAGGCTG CCCTTTGTAG GCAGCCCGGT GAAAATGGAT
GGAGAGGCGC TCAATTCGCC CCTGCCGCCG CCACGACTTG GGGAGCATCA GCAGGAGCTG
CTGGCCTGGC TCGATGGGCT TGAGTCGTAA
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| Protein sequence | MKQPLKGLRV LDLSRVLAGP WCSQLLADMG AEVIKIEHPD GGDDTRHWGP PYAGGHTQGD
AAYFLAANRG KKSLLLDLKN PHDVAQIQKL ARHSDILLEN FKVGGLAKYG LDYGSLKAMN
PQLVYCSITG FGQSGPDAPR AGYDFMIQAM GGLMSLTGAA DDGGEPMKTG VAITDLFTGL
YAANAILAAI VARQSTGLGC HIDMALFDVQ LAMLANQAQN FLASGQNPPR LGNAHPNIVP
YQAFACADGH LILAVGNDGQ FARFCELAGL HELPHDSRFA TNAGRVRHRE TLLPLIKAAM
LTKSKGEWLA LLNDAGVPAG PINTVSEALD EPQAQHRQMQ IERDFNGERL PFVGSPVKMD
GEALNSPLPP PRLGEHQQEL LAWLDGLES
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