| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3297 |
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| Symbol | |
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| ID | 4605544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3919355 |
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| End bp | 3920545 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639782717 |
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| Product | hypothetical protein |
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| Protein accession | YP_929169 |
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| Protein GI | 119776429 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2828] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02334] probable AcnD-accessory protein PrpF |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.126958 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAAC CACAGATCCG CATTCCTGCC ACCTATATGC GTGGCGGAAC CTCCAAAGGG
GTGTTTTTCC GCCTCGACGA TTTGCCTGAG GCGGCCCGGG TGCCGGGTGC AGAGCGTGAT
GCGCTGCTGC TGCGGGTGAT TGGCAGCCCC GACCCCTATG GCAAGCACAC CGACGGCATG
GGCGGCGCCA CGTCCAGCAC CAGCAAGTGC GTGATCATGA ATAAAAGCAG CGTGCCCGGT
CACGATGTGG ATTACCTCTA CGGTCAGGTG TCCATCGACA CCGCCTTCGT CGACTGGAGC
GGTAACTGCG GCAACCTGTC CACCGCCGCC GGCGCCTTTG CGATTCACGC GGGTTTGGTG
GATGCTTCCC GGGTGCCTGA AAACGGTATC TGCGAAGTGC GGATCTGGCA GGCCAATATC
GGTAAAACCA TTATTGCCCA TGTGCCCGTG ACCAACGGCG AAGTGCAGGA AACCGGTGAT
TTTGAACTGG ATGGGGTGAC CTTTCCGGCC GCCGAAATCG TGCTGGAGTT TGTCGATCCT
GCGGATGATG GAGAGGATGG TGGCGCCATG TTCCCCACCG GCAATCTGGT GGACGAGCTG
GAAGTACCCT CCGAGGTGCA CCCGAGCGGT AAAATCCGCG CGACCCTGAT AAACGCCGGT
ATCCCCACGA TTTTCGTCAA CGCCGAAGAC CTGGGTTATC GCGGCGATGA GCTGCAGGAG
GCCATCAATG GCAATCCGGT GGCCCTTGCC ATGTTTGAGC AGCTGCGTGC CCACGGCGCC
ATCAGGATGG GGCTTATCAA GACCCTGGAT GAAGCCAAAA CCCGCCAGCA CACCCCCAAG
GTGGCCTTTG TGACCAACCC CATGACCCAT GTGGTGTCGA GCGGCAAGAC AGTGGCTGAG
GATGAAGTCG ACCTGCTGGT CCGGGCGCTG TCCATGGGCA AGCTGCACCA CGCCATGATG
GGCACAGCTG CGGTGGCCAT AGGCACGGCG GCCGCCATTC CCGGCACATT GGTGAATCTT
GCCGCCGGTG GCGGCGAGCG TCAGGCGGTG CGTTTCGGCC ATCCGTCCGG CACGTTACGC
GTAGGCGCCG AGGCCAAACA GGTGGACGGC CAGTGGACTG TCACCAAGGC CATCATGAGC
CGCTCGGCGC GCATCCTGAT GGAAGGCACT GTAAGGGTGC CTCAAGCTTA A
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| Protein sequence | MFKPQIRIPA TYMRGGTSKG VFFRLDDLPE AARVPGAERD ALLLRVIGSP DPYGKHTDGM
GGATSSTSKC VIMNKSSVPG HDVDYLYGQV SIDTAFVDWS GNCGNLSTAA GAFAIHAGLV
DASRVPENGI CEVRIWQANI GKTIIAHVPV TNGEVQETGD FELDGVTFPA AEIVLEFVDP
ADDGEDGGAM FPTGNLVDEL EVPSEVHPSG KIRATLINAG IPTIFVNAED LGYRGDELQE
AINGNPVALA MFEQLRAHGA IRMGLIKTLD EAKTRQHTPK VAFVTNPMTH VVSSGKTVAE
DEVDLLVRAL SMGKLHHAMM GTAAVAIGTA AAIPGTLVNL AAGGGERQAV RFGHPSGTLR
VGAEAKQVDG QWTVTKAIMS RSARILMEGT VRVPQA
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