| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3296 |
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| Symbol | |
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| ID | 4605543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3916406 |
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| End bp | 3918991 |
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| Gene Length | 2586 bp |
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| Protein Length | 861 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639782716 |
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| Product | aconitate hydratase |
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| Protein accession | YP_929168 |
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| Protein GI | 119776428 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1048] Aconitase A |
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| TIGRFAM ID | [TIGR01341] aconitate hydratase 1
[TIGR02333] 2-methylisocitrate dehydratase, Fe/S-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0890897 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACTC AATTCCGTAA GCCGCTGCCC GGCACCAATT TAAGCTTCTT CGATACCCGC
GAGGCGGTGG ACGCCATCGC CCCCGGCGCC TTCGACAAAC TGCCCTACAC CTCCAAGGTA
CTGGCCGAAA ACCTGCTCCG CAAGGCCGAG CCCGCGCGCC TGAACGACTT CTTAAGCCAG
CTGATTTTCC GTAAGCAAGA CCTCGACTTC CCCTGGTTCC CGGCTCGCGT GGTGTGCCAC
GACATTCTCG GCCAAACGGC CCTGGTGGAC CTTGCCGGCC TGCGTGATGC CATTGCTGCC
AAGGGCGGCG ACCCGGCCAA GGTGAATCCT GTGGTGCCAA CCCAGCTGAT TGTGGATCAC
TCACTGGCGG TGGAGCACGG CGGCTTCGAG AAGGATGCCT TTGAGAAAAA CCGTGCCATC
GAAGACAGAC GCAACGACGA TCGCTTCCAC TTTATCAACT GGACCAAAAA GGCCTTCCGC
AATGTGGATG TGATCCCCCC CGGCAACGGC ATCATGCACC AGATCAACCT GGAAAAGATG
TCACCGGTTA TTCAGGTGCG TGACGGCATC GCCTTCCCCG ACACCTGCGT CGGCACCGAC
AGCCACACCC CCCACGTGGA TTCCCTCGGC GTTATCGCCA TCGGCGTGGG TGGCCTTGAA
GCCGAAAACG TGATGCTGGG CCGCGCTTCC TGGATGCGTC TGCCGGATAT CGTTGGTGTT
GAGCTCACCG GCAAGCCAAA CCCCGGCATT ACCGCCACCG ACGTGGTGCT GGCCTTGACC
GAATTTTTGC GTAAAGAGCG GGTGGTGGGT GCCTACCTTG AGTTCTTCGG CGAAGGCGCC
AAGGCGCTCA CCCTGGGCGA CCGTGCCACC ATCTCCAACA TGACCCCCGA ATATGGCGCC
ACCGCCGCCA TGTTCTATAT CGACGAGCAG ACCATCGACT ATCTGCGCCT CACCGGCCGT
GATGAAAAGC AGGTCGAGCT GGTTGAAAAC TATGCCAAAA CCACAGGCCT GTGGGCGGAT
GCCATGACGG GTGCCGACTA TGGCCGGATA CTGACGTTTG ACCTCTCCAG CGTGGTGCGC
AACATGGCGG GGCCTTCCAA CCCCCATGCC CGTTTGGCCA CCAGCGATCT GGCCGCCAAG
GGTATTGCCG CCGACTGGCA AGAAGAATCA GGCAAGATGC CCGATGGCGC GGTGATCATC
GCCGCTATCA CCAGCTGTAC CAACACCAGT AACCCCCGCA ACGTGATTGC CGCAGGCCTC
ATTGCCCGCA ACGCGGTGCA AAAAGGTCTG GTGCGCAAGC CATGGGTGAA AACCTCACTG
GCCCCCGGCT CCAAGGCGGT GGAGCTGTAC CTGAAAGAAG CAGGTCTCTT GCCGTACCTT
GAACAGCTCG GCTTTGGCAT TGTTGCGTTT GCCTGTACCA CCTGTAACGG CATGAGTGGC
GCGCTGGACC CAGTCATCCA GCAGGAAATC ATCGAGCGGG ATCTGTACGC CACCGCCGTG
CTGTCGGGCA ACCGTAACTT CGACGGCCGT ATTCACCCCT ATGCCAAGCA GGCGTTTCTG
GCTTCGCCGC CTTTGGTGGT GGCCTACGCC ATCGCGGGCA CAGTGCGCTT CGATATCGAA
AAAGATGTGC TGGGCATAGA CGATGCTGGC AATGCAGTGA CCCTTAAAGA CCTGTGGCCA
GAAGATGCGG AAATCGATGC CATCATCAAG TCATCGGTGA AGCCTGAGCA GTTTCGCGCC
GTGTACGACC CCATGTTTAA TCTCGCCGTG GAATACGGCA CCGAGAAGCC ACTTTACGAC
TGGCGCCCAC AGAGCACCTA CATCCGCCGC CCGCCCTACT GGGAAGGCGC CCTTGCCGGT
GAGCGGACTT TAAGCGGTAT GCGGCCACTG GCGGTGCTGG GTGACAACAT CACCACAGAT
CACCTGTCGC CTTCCAACGC GATTCTGGCA AGCTCCGCCG CCGGTGAGTA TCTCGCCAAA
ATGGGCCTGC CGGAGGAAGA CTTTAACTCC TACGCCACCC ACAGGGGCGA CCACCTGACT
GCCCAGCGCG CCACCTTCGC CAACCCCAAG CTCTTTAACG AGATGGTGAA GGATGCTGAC
GGCAAGGTGA AGCAGGGCTC GCTCGCTCGC CTCGAGCCCG AGGGCAAGGT ACTGCGCATG
TGGGAAACCA TTGAAACCTA CATGGAGCGC AAGCAGCCAC TGATCATAGT GGCCGGTAAG
GACTACGGTC AGGGCTCCAG CCGTGACTGG GCCGCCAAGG GCGTGCGTCT TGCCGGTGTC
GAAGTGATTG TGGCCGAAGG CTTCGAGCGT ATTCACCGCA CCAACCTGGT GGGCATGGGC
GTGTTGCCGC TGGAATTTAT GCCCGGCGAA ACCCGCATGA CCTACGGCAT AGACGGCACT
GAAACCTTCG ATGTGAAGGG CGAGCGCACC CCGGGTGCCG AGCTAACGCT CCTTATCCGT
CGCCAAAATG GCGAAACAGT GGAAGTGCCT GTGCGCTGCC GTTTGGATAC CGCCGAAGAA
GTGTCCATTT ATGAGGCAGG GGGAGTTCTC CAACGCTTCG CCCAGGACTT CTTGGCCAAT
TCATAA
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| Protein sequence | MNTQFRKPLP GTNLSFFDTR EAVDAIAPGA FDKLPYTSKV LAENLLRKAE PARLNDFLSQ
LIFRKQDLDF PWFPARVVCH DILGQTALVD LAGLRDAIAA KGGDPAKVNP VVPTQLIVDH
SLAVEHGGFE KDAFEKNRAI EDRRNDDRFH FINWTKKAFR NVDVIPPGNG IMHQINLEKM
SPVIQVRDGI AFPDTCVGTD SHTPHVDSLG VIAIGVGGLE AENVMLGRAS WMRLPDIVGV
ELTGKPNPGI TATDVVLALT EFLRKERVVG AYLEFFGEGA KALTLGDRAT ISNMTPEYGA
TAAMFYIDEQ TIDYLRLTGR DEKQVELVEN YAKTTGLWAD AMTGADYGRI LTFDLSSVVR
NMAGPSNPHA RLATSDLAAK GIAADWQEES GKMPDGAVII AAITSCTNTS NPRNVIAAGL
IARNAVQKGL VRKPWVKTSL APGSKAVELY LKEAGLLPYL EQLGFGIVAF ACTTCNGMSG
ALDPVIQQEI IERDLYATAV LSGNRNFDGR IHPYAKQAFL ASPPLVVAYA IAGTVRFDIE
KDVLGIDDAG NAVTLKDLWP EDAEIDAIIK SSVKPEQFRA VYDPMFNLAV EYGTEKPLYD
WRPQSTYIRR PPYWEGALAG ERTLSGMRPL AVLGDNITTD HLSPSNAILA SSAAGEYLAK
MGLPEEDFNS YATHRGDHLT AQRATFANPK LFNEMVKDAD GKVKQGSLAR LEPEGKVLRM
WETIETYMER KQPLIIVAGK DYGQGSSRDW AAKGVRLAGV EVIVAEGFER IHRTNLVGMG
VLPLEFMPGE TRMTYGIDGT ETFDVKGERT PGAELTLLIR RQNGETVEVP VRCRLDTAEE
VSIYEAGGVL QRFAQDFLAN S
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