| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3295 |
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| Symbol | |
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| ID | 4605542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3915169 |
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| End bp | 3916305 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639782715 |
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| Product | methylcitrate synthase |
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| Protein accession | YP_929167 |
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| Protein GI | 119776427 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0372] Citrate synthase |
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| TIGRFAM ID | [TIGR01800] 2-methylcitrate synthase/citrate synthase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.11596 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAGA CAACCGATAA AAAACTGAGT GGTGCAGGCC TGCGTGGTCA GAGCGCCGGT
GAAACCGCCC TGAGCACAGT AGGTAAATCC GGCTCAGGCC TCACCTACCG TGGCTACGAC
GTAAAAGATC TGGCCGAAAA CGCCAGCTTC GAAGAAGTGG CCTTTCTCAT TCTGTACGGC
GAGCTGCCCA CTCAACTGGA GCTGGACAAC TACCGCGCCA AGCTCAAAGG CCTGCGCGGC
CTGCCACAGG CACTGAAAGA AGTGCTGGAG CGCATCCCCG CCAATGCCCA TCCCATGGAT
GTGCTGCGTA CCGGCTGCTC TATGCTGGGC AACCTGGAAA CCGAACACAG CTTTGCCGAC
CAGTTTGATG TAACCAACCG CATGCTGGCG GTGTTCCCGT CCATCATCTG CTACTGGTAT
CGTTTCAGCC ACGATGGCGT GCGCATCGAA ACCGAGACCG ATGACGAGCA AATCGGTGCC
CACTTCCTGC ACCTGCTGCA CGGCAAGGCG CCTTCTGCCC TGCATGCCCG GGTAATGGAT
GTATCCCTCA TCCTCTACGC AGAGCACGAG TTCAACGCCT CTACCTTTAC TGCCCGCGTC
TGTGCCTCGA CCCTGTCTGA TATGCACTCT TGCGTAACCG GTGCCATCGG TTCACTGCGC
GGCCCGCTGC ACGGCGGCGC CAACGAGGCG GCCATGGAGC TTATCCAGGA CATGCGCGAT
GAGCAGCACG CCCGCGACGT ACTGGCCGGT ATGCTGGAGC GCAAAGAAAA AATCATGGGC
TTTGGTCACG CCATCTACCG CGAATCCGAC CCTCGTAACG CCATCATCAA AGAATGGTCT
GAAAAGCTCG CCAAGGAATA TGGCGACGAC CGTCTGTACC GTGTTTCCGT GGCCTGCGAA
GCCTTTATGT GGGAACAAAA GAAGCTCTTC TGTAACGCCG ACTTCTTCCA TGCCAGCGCC
TATCACTTCA TGGGCATCCC CACCAAGCTG TTCACCCCCA TATTCGTATG TTCACGGGTG
AGCGGCTGGA CTGCCCACGT GATGGAGCAG CGCAGCAACA ACCGCATCAT CCGCCCAAGC
GCCGATTATG TGGGTGTGGA ACTGCGCAGC GTGACCCCAA TCAGCGAGCG CGGCTGA
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| Protein sequence | MAETTDKKLS GAGLRGQSAG ETALSTVGKS GSGLTYRGYD VKDLAENASF EEVAFLILYG
ELPTQLELDN YRAKLKGLRG LPQALKEVLE RIPANAHPMD VLRTGCSMLG NLETEHSFAD
QFDVTNRMLA VFPSIICYWY RFSHDGVRIE TETDDEQIGA HFLHLLHGKA PSALHARVMD
VSLILYAEHE FNASTFTARV CASTLSDMHS CVTGAIGSLR GPLHGGANEA AMELIQDMRD
EQHARDVLAG MLERKEKIMG FGHAIYRESD PRNAIIKEWS EKLAKEYGDD RLYRVSVACE
AFMWEQKKLF CNADFFHASA YHFMGIPTKL FTPIFVCSRV SGWTAHVMEQ RSNNRIIRPS
ADYVGVELRS VTPISERG
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