| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3284 |
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| Symbol | |
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| ID | 4605531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3901708 |
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| End bp | 3903018 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639782704 |
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| Product | hemolysin, putative |
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| Protein accession | YP_929156 |
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| Protein GI | 119776416 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTCT TCGAAAATAG TTTGATTATT CTGATGCTTA TCGGCATCAG TTGTTTTTTT
TCCATGTCGG AAATCGCCCT GGCGGCCTCC CGTAAAATTC GGCTGCGACA GTTGGCCGAT
GAAGGCAATG AGCGGGCCCG AAAAGTACTT GAGCTGCAGG CTCATCCCGG CAGCTTCTTT
ACCGTGGTGC AAATAGGCCT CAATGCGGTG GCCATCATGG GCGGTATCGT GGGGGAGTCG
GCTTTTACCC CCCATATCAT GGCCTTGCTG GATGGTATAG TGCCAGCTAA GTGGCTGGGC
CAGTTCAGTT TTATCTTGTC TTTTATGCTG GTGACCAGCC TGTTTATTTT GCTGGCAGAT
CTAATGCCAA AGCGTATCGC CATGGCTATG CCAGAGCGTG TTGCTGTGTC ATTGGTGGGG
GCCATGGGCC TGTGCATTAC CGTGCTGCGC CCCCTGGTGT GGGTGTTCAA TGGCCTCGCC
AATGGTTTGT TCCGTATGCT GCGGATCCCC ACAGAGCGTA ACGATGCCAT CACAGAGGAT
GACATTTACG CGGTGATGGA TGCCGGTGCT GAAGCCGGTG TTATCGACAA GGGCGAACAG
CAGATGATGG AGAACGTGTT TGAAATGCAA AGCGTTCCTG TGACCTCAGC CATGACACCA
AGGGAAAGCC TGGTGTTCTT TCTGCAAAGC GACACCGAAG AAGACATCAA GCGTAAAATC
GCCGCCGACC CCCACAGCCA GTTTCTGCTC TGTGATGGCC AGCTGGATGC CATCAAGGGC
TATGTGGACT CCAAGGATTT GCTTATCAAG GTGATAAGCG GTCAGGCATT AAACCTGAAA
GACCCATCAC TGGTACAAAC CTGCCCCATT ATCCCGGATA CCCTGAGCCT GTCTGAGGCG
CTGGATTACT TCCGTAACAA CAGGGTCGAC TTTGCAGTTG TGCTCAATGA GTATGCGTTG
GTGCTGGGGG TGGTGACCTT TAACGATCTG CAAAGCGCTG TGATGGGGAC CTGGTCGCTG
GCCGAAGGTG AAGAACAAAT TGTGGCCCGG GATCCTTCGT CCTGGCTGGT GGATGGGGTA
ACGCCTATTA CCGATGTGAT GCGTGCCTTT GGCATCGACA GTTTTCCCCA GAGCCAGAAC
TATGAAACCA TCGCAGGTTT CATTATGTTT ATGCTGCGTA AAATCCCCCG CCGTACCGAC
TTTGTGGTCT ATGCCGGTTA CAAATTTGAA GTGGTCGATA TCGACTCATA CAAGGTGGAT
CAGCTGCTGG TGACCAAGGT GGAGTTGCCA CCCGGTGCTG AGGATCAGTA A
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| Protein sequence | MSFFENSLII LMLIGISCFF SMSEIALAAS RKIRLRQLAD EGNERARKVL ELQAHPGSFF
TVVQIGLNAV AIMGGIVGES AFTPHIMALL DGIVPAKWLG QFSFILSFML VTSLFILLAD
LMPKRIAMAM PERVAVSLVG AMGLCITVLR PLVWVFNGLA NGLFRMLRIP TERNDAITED
DIYAVMDAGA EAGVIDKGEQ QMMENVFEMQ SVPVTSAMTP RESLVFFLQS DTEEDIKRKI
AADPHSQFLL CDGQLDAIKG YVDSKDLLIK VISGQALNLK DPSLVQTCPI IPDTLSLSEA
LDYFRNNRVD FAVVLNEYAL VLGVVTFNDL QSAVMGTWSL AEGEEQIVAR DPSSWLVDGV
TPITDVMRAF GIDSFPQSQN YETIAGFIMF MLRKIPRRTD FVVYAGYKFE VVDIDSYKVD
QLLVTKVELP PGAEDQ
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