| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3281 |
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| Symbol | |
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| ID | 4605528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3896911 |
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| End bp | 3898581 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639782701 |
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| Product | acetolactate synthase 2 catalytic subunit |
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| Protein accession | YP_929153 |
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| Protein GI | 119776413 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGGAC AGACGATGAG AGGGGCTGAC GCAGTCATCA AGGTATTGGC CGCCCATGGG
GTGAACACGG TATTCGGTTA TCCCGGTGGC GCCATCATGC CCATCTACGA CGCGCTTTAC
GGCAGTGAAG TCGAGCACAC CCTGTGCCGC CACGAACAGG GTGCCGGCTT TGCTGCCGTG
GGCTATGCCC GTGCCAGTGG CAAAACCGGC GTCTGCTTCG CCACCTCTGG CCCCGGCGCC
ACCAACCTCA TCACCGCCCT TGCCGATGCT CTGCTGGATT CAGTGCCCGT GGTGGCCATC
ACGGGCCAGG TGTCCACCTC GGTTATCGGC ACCGATGCCT TTCAGGAAAT CGATGTACTT
GGTATGAGCC TGTCCTGCAC CAAGCACAGC TTTATGGTGC AAACAGTCGA TGAGCTGGTC
CCCACGCTGT ATCGGGCCTT TGAGCTGGCG GCCTCCGGCC GACCCGGGCC TGTGCTGGTT
GACATCCCCA AAGATATTCA AATAGCCAAA CTCGAATACA GAGCGCCGCT GTTGGCCGTT
GCAGATGAAC CCAAAGTTCA GGACGCCGAC ATCGATGCCG CCCGCGCCCT GATAGCGGCC
GCCAAAAAGC CCATGTTGTA CGTAGGCGGT GGTGTGGGTA TGGCCGGCGC TGTCGAGCCG
CTGCGCCATT TTATCAAGGC CACCTATATG CCGTCCGTGG CTACCCTCAA GGGCCTTGGT
GCTATCCCCC ATGGCACACC TGGCTACCTG GGCATGCTGG GGATGCACGG CGGCAAGGCC
GCTAACCTTG CGGTGCAGGA ATGTGATTTG CTGATGGTGG TTGGCGCCCG TTTCGATGAC
CGCGTTACCG GCCGTTTGGC CTCATTTGCG CCCAATGCAA AAGTGCTGCA TCTGGATATA
GATGCCGCCG AGCTTGGCAA GCTGCGTCAG CCCGATGTGG CCATTGCCGC CGAGCTGCGT
GTGGTGTTGC CAATGCTTGA GATGCAGCTT GATATAGACC CTTGGCGCGC TGAGGTCGAA
GCGCTCGCCG CCGAACACCG CTGGGATTAC AACCACCCCG GCAGCCTCAT CTACGCCCCT
GCCATGCTGC GCCGTTTGGC CAACAAGTTG CCCGAGGACA GCGTAGTGAG CTGCGATGTG
GGCCAGCACC AGATGTGGGT TGCTCAGCAT ATGCACTTCC GCCGCCCTGA AGATCATTTG
TCCAGTGCAG GTCTTGGCAC CATGGGTTTT GGCTTGCCAG CTGCCATAGG CGCTCAGATG
GCGCGCCCCG ATGCCACCGT GGTGGCTGTG TCAGGCGATG GCTCTTTCAT GATGAATGTG
CAGGAACTGA CTACCATCAA ACGCCGCAAG CTGCCGGTGA AAATCCTGCT TATCGACAAC
CAGCGTTTGG GCATGGTGAA GCAGTGGCAA CAGCTGTTTT TTGAAGAGCG TTACAGCGAA
ACCAACCTGT CAGACAACCC GGATTTTGTT GCGCTGGCGT CGGCCTTTGA TATCCCCGGG
CGCACCATTT TTGCCGCCGA AGAAGTGGAA GAAGCCCTGA CCGAAATGCT CACCAGTAAG
GGGCCTTACC TCTTGCACGT GGCCATAGAT GATGCCTTTA ACGTTTGGCC CCTGGTTCCG
CCGGGTGCCT CCAACAGCGA TATGATGGAA GAAATGGAGA GAAGCACATG A
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| Protein sequence | MEGQTMRGAD AVIKVLAAHG VNTVFGYPGG AIMPIYDALY GSEVEHTLCR HEQGAGFAAV
GYARASGKTG VCFATSGPGA TNLITALADA LLDSVPVVAI TGQVSTSVIG TDAFQEIDVL
GMSLSCTKHS FMVQTVDELV PTLYRAFELA ASGRPGPVLV DIPKDIQIAK LEYRAPLLAV
ADEPKVQDAD IDAARALIAA AKKPMLYVGG GVGMAGAVEP LRHFIKATYM PSVATLKGLG
AIPHGTPGYL GMLGMHGGKA ANLAVQECDL LMVVGARFDD RVTGRLASFA PNAKVLHLDI
DAAELGKLRQ PDVAIAAELR VVLPMLEMQL DIDPWRAEVE ALAAEHRWDY NHPGSLIYAP
AMLRRLANKL PEDSVVSCDV GQHQMWVAQH MHFRRPEDHL SSAGLGTMGF GLPAAIGAQM
ARPDATVVAV SGDGSFMMNV QELTTIKRRK LPVKILLIDN QRLGMVKQWQ QLFFEERYSE
TNLSDNPDFV ALASAFDIPG RTIFAAEEVE EALTEMLTSK GPYLLHVAID DAFNVWPLVP
PGASNSDMME EMERST
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