| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3277 |
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| Symbol | |
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| ID | 4605524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3891856 |
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| End bp | 3892986 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639782697 |
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| Product | Serine--pyruvate transaminase |
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| Protein accession | YP_929149 |
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| Protein GI | 119776409 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCCG CTCCCAAGAT AGCGCCCTTT ATGCCGCCAC GCCGTATTCT GATGGGCCCG
GGCCCTTCAG ATGTGTATCC CGAGGTGTTG CTGGCCCAGT CACGCCCCAC CGTGGGCCAT
CTGGACCCCT TGTTTGTGGC CATGATGGAT GAGCTCAAAG CGCTGCTGCA ATATGCCTTT
CAGACCCAAA ACGAAGTGAC CTTGGCGGTA TCGGCTCCAG GCAGCGCCGG TATGGAAACC
TGTTTTGTAA ACCTGGTGGA GCCTGGCGAG AAGGTTGTGG TTTGCCGCAA TGGGGTGTTT
GGCGAGCGGA TGCGCCAGAA CGTGGAGCGC TGCGGCGGTG TTGCCGTGGT GGTGGATTTC
CCCTGGGGCG CACCGGTCGA CCCGCAAGTG GTTGAAGGTG TGCTGAAGCA GCATCCGGAT
GCAAGCTACC TTGCCTTTGT CCATGCTGAA ACCAGCACGG GCGCGCTGTC GGACGCCAAA
ACCCTGTGTG CTCTTGCCCG CGAACATAAC TGCCTGTCGA TTGTGGATGC GGTGACCTCC
CTTGGTGGGG TTGAACTCAG GGTCGATGAG TGGGGCATAG ATGCCATTTA TTCGGGCAGC
CAGAAGTGCT TATCCTGTGT ACCCGGCTTA TCGCCTGTGT CCTTCTCACC CCGAGCGGTA
GAGAAGCTTA AAAGCCGCAA GACGCCGGTG CAGAGCTGGT TTTTGGATCA GACTCTGGTG
ATGGGCTATT GGGGTGGCAG TGGCAAGCGC GCTTACCACC ATACCGCGCC GGTTAACGCC
CTGTATGCCT TGCACGAATC GTTGCGGCTG CTCGCCGAAG AAGGCCTCGA AAACGCCTGG
GCCAGACATC AACACATGCA TCAGCTGCTT AAAGCCGGCC TCGAAAAGTT GGGGCTCGGC
TTTGTGGTGG ATGAGGCTTA CCGCCTGCCG CAACTCAACG CCGTGTACAT TCCAGAGGGT
GTGGATGACG CTGCCGTGCG CAGCCAGCTG CTTAAGGGTT ATAACCTTGA GATTGGTGCC
GGACTCGGAG ACCTGGCAGG AAAGGCTTGG CGAATTGGGC TCATGGGCTA TGGCGCACGG
GCCGAAAATG TGGCAATTTG CCTGAAGGCT CTGGAAGAGG TGCTGCAGTA A
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| Protein sequence | MQAAPKIAPF MPPRRILMGP GPSDVYPEVL LAQSRPTVGH LDPLFVAMMD ELKALLQYAF
QTQNEVTLAV SAPGSAGMET CFVNLVEPGE KVVVCRNGVF GERMRQNVER CGGVAVVVDF
PWGAPVDPQV VEGVLKQHPD ASYLAFVHAE TSTGALSDAK TLCALAREHN CLSIVDAVTS
LGGVELRVDE WGIDAIYSGS QKCLSCVPGL SPVSFSPRAV EKLKSRKTPV QSWFLDQTLV
MGYWGGSGKR AYHHTAPVNA LYALHESLRL LAEEGLENAW ARHQHMHQLL KAGLEKLGLG
FVVDEAYRLP QLNAVYIPEG VDDAAVRSQL LKGYNLEIGA GLGDLAGKAW RIGLMGYGAR
AENVAICLKA LEEVLQ
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