| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3274 |
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| Symbol | |
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| ID | 4605521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3888687 |
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| End bp | 3890126 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639782694 |
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| Product | hypothetical protein |
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| Protein accession | YP_929146 |
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| Protein GI | 119776406 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4452] Inner membrane protein involved in colicin E2 resistance |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGACA TGTTTTTCGG CCTCATGGCG CTCGCGCTCC TCGGGGCCAT TGGCTTTGGT
GCCTTTGTGG CCATTCGCGC CGGACTGACA CGACTTTACG GCAATACCGA TAATCCATTA
TTGCTGAACA GGATCGCCCT CATTCTCAAG GGATCACTCA CCCTGATGCT GTGCCTGCTG
GCCATCATTC CGCTGACACT GGTACAGGAC CTGGCCTCAG ACAGAGAGCG TCTGTACCGT
GATGTGGTGC GGGACATAGG TCAGGCATGG GGCGAAGAGC AGGTTCTGGC GGGTCCCGTG
TTGGTGCTTC CTTATCGCTA TTCGGTGCTC ACCGAAGAAA CCAGCGCCGA TGGCAGTCGC
AAGCAAAGGC GCAGCAGCAT TGAGGATGAG CTCCTTATCC TGCCCGAGCA CCTGAAAATG
AAGGCGAGCC TCAACCATGA CTTCCGCGAC CGCGGCATTT ACCACTCACT GGTGTATCAA
AGTGGCGTTG AGGGGCAGGC CGAGTTTTCC CTGAACCTCC CCCTTATCAG CAATCTGGAA
GCTTACGAAT TTAATCGCGC CAGACTGGTA TTTGGTCTGT CTTCCAATCA GGCCATCGAT
GGCGTGGATA ATTTTGTGGT CAGTGGCGAT GGCTTGAGCT CCCACGGCTC GCTGATGTCA
GGCACGGGCC TGGCTCAGGA GGCACTTAGT CGGGGATTTC ATCAACCGGT GCAGCTTGGA
CAAAACACAG CCCCCTTCAA AGTGGACTTT AAACTGCGCC TCAGGGGCTC ACAGGGTATT
GGGTTTCTGC CGCTCGGCGA AGACTCACGC TTCGAACTCA ATGCCGACTG GCCTCATCCC
AGTTTCAATG GCATTTTGCC CGAAGCCCGC GAAATAAATG CCAATGGCTT TAATGCCAAC
TGGCACATCA GCCACCTGAG CCGCAACTAC CCACAAATCA TGCGCGCTTC TCAACCCATG
GATCTGATGG AGACCCGGGC ACACACGCAG CTGTTTGAAC CCGTCACCCA CTACGGCAAG
GTAGAACGCG CCATTAAATA TGGTCTGCTG TTTGTGGCCC TGACCTTTAT CCTGCTGCTG
ATGTTTGAAC TTGGGCAGGG ACAAGCCTTG TCGGCCTTGC AATACCTGCT GGTTGGCGCA
GCCATGACCC TGTTTTATTT GTTGCTGCTG GCATTGTCAG AGCATTTGAG TTTTGGTCAG
GCCTTTATGA TTGCCGCAGC CGTGCCCGTG CTCAGCATTC CTGCCTATGT GGCCAGCGCC
ACCCAAAGTT ATGCTCGCGG CAGCATCATG CTGGCCATGT TGCTCGGTCT CTATGGTCTG
CTGTATTCCA TTTTGCGGCT CGAAGACTAT GCCCTGCTGA TGGGCAGCAT GCTCTTGGTT
ACCGTCCTCT TGGTACTCAT GTACCTGACA AGACGCCAGG GTAAATGCCT CCCGCAATAG
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| Protein sequence | MADMFFGLMA LALLGAIGFG AFVAIRAGLT RLYGNTDNPL LLNRIALILK GSLTLMLCLL
AIIPLTLVQD LASDRERLYR DVVRDIGQAW GEEQVLAGPV LVLPYRYSVL TEETSADGSR
KQRRSSIEDE LLILPEHLKM KASLNHDFRD RGIYHSLVYQ SGVEGQAEFS LNLPLISNLE
AYEFNRARLV FGLSSNQAID GVDNFVVSGD GLSSHGSLMS GTGLAQEALS RGFHQPVQLG
QNTAPFKVDF KLRLRGSQGI GFLPLGEDSR FELNADWPHP SFNGILPEAR EINANGFNAN
WHISHLSRNY PQIMRASQPM DLMETRAHTQ LFEPVTHYGK VERAIKYGLL FVALTFILLL
MFELGQGQAL SALQYLLVGA AMTLFYLLLL ALSEHLSFGQ AFMIAAAVPV LSIPAYVASA
TQSYARGSIM LAMLLGLYGL LYSILRLEDY ALLMGSMLLV TVLLVLMYLT RRQGKCLPQ
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