Gene Sama_3271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3271 
Symbol 
ID4605518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3887161 
End bp3887418 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content51% 
IMG OID639782691 
Producthypothetical protein 
Protein accessionYP_929143 
Protein GI119776403 
COG category[S] Function unknown 
COG ID[COG2960] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAACC CCAAAAAAAT CGAAGACTTG GCCAAACAGC TCAGTGACAA CCTTCCTTCT 
GGCCTCAAGC AGTTTGCCGG AGAAGTGGAA GAGCGCAGCA AGCAGGTATT GCAAAGCCAG
TTGATGAAAC TCGACCTGGT ATCCCGGGAA GAATTTGAGG TGCAGCAACA TGTGCTGCTG
CGTACCCGCG AAAAACTGGA AGCGTTGCAG ACCAAGGTCG AAGCACTGGA AAAACTGTTG
GAAGACAAGC AGGCCTGA
 
Protein sequence
MLNPKKIEDL AKQLSDNLPS GLKQFAGEVE ERSKQVLQSQ LMKLDLVSRE EFEVQQHVLL 
RTREKLEALQ TKVEALEKLL EDKQA