| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3270 |
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| Symbol | |
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| ID | 4605517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3884878 |
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| End bp | 3887034 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639782690 |
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| Product | catalase |
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| Protein accession | YP_929142 |
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| Protein GI | 119776402 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0376] Catalase (peroxidase I) |
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| TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAATG AAGGCAAATG TCCGGTAATG CACGGCGGTG CAACCTCTGC CACCCAGGCC
GACAATCATT GGTGGCCCAA AGCCCTGAAC CTCGACATAC TCCACCAGCA CGACAGTAAA
ACCAACCCCA TGGCACCGGG CTTTAATTAC CGGGAAGCCC TGAAAGGCCT CGATGTGGAG
GCACTCAAAC AAGATCTCAA AGCCCTGATG ACCGACAGCC AGGCCTGGTG GCCAGCGGAC
TGGGGCCATT ATGGCGGCCT GATGATCCGC ATGGCGTGGC ACTCGGCCGG CACCTATCGC
ATTGCCGACG GTCGTGGTGG TGGCGGCCAT GGTGCACAGC GCTTTGCCCC ACTCAATTCC
TGGCCCGACA ATGGCAATCT CGACAAGGCC AGGCGCCTGC TGTGGCCCAT CAAACAGAAA
TACGGCAACA AAGTGAGCTG GGCCGACTTG ATGATTTTGG CAGGCAACAT GGCGTATGAA
TCCATGGGGC TGAAAACCTT CGGCTTTGCC TTTGGTCGTG AAGACATCTG GCACCCCGAG
AAAGACACCT ACTGGGGCGC AGAAAAAGAA TGGTTGGCCC CCAGCGGCGG CGCCAACAGT
CGCTATTCCG GGGTTCGCGA TCTGCAAAAC CCACTGGCAG CAGTGATGAT GGGGCTGATT
TATGTCAACC CGGAAGGGGT CGATGGCAAT CCAGACCCAC TGAAAACCGC CCAGGATATG
CGCGTGACCT TCGCCCGAAT GGCGATGAAT GACGAAGAAA CTGTGGCACT CACCGCCGGT
GGCCATACCG TGGGTAAAGC CCATGGTAAT GGTAACGCCG CCAATCTGGG GCCTGAACCT
GAAGCCGCGC CTTTGGAAGA GCAAGGCTTT GGCTGGATGA ATCATCAAAG TCGCGGCATA
GGCCGCAACA CAGTCACCAG CGGAATCGAA GGCGCCTGGA CCACCCACCC CACCCGTTGG
GACAACGGTT ATTTCCATCT GCTGTTCAGC TACGACTGGG CACTCACCAA GAGTCCGGCA
GGCGCGTGGC AGTGGGAGCC GGTGAACATC AGGGAAGAAG ACAAGCCAGT GGATGTGGAA
GACCCCAACA TCCGCAGCAA CCCCATGATG ACAGACGCCG ACATGGCGCT GAAGATGGAC
CCGGATTACC GCCGCATCGC CGAAAGATTC TTCCACGATC CCGACTATTT TGCCGACACC
TTTGCCAGGG CCTGGTTCAA GTTGACTCAC AGAGACATGG GCCCCAAATC CCGCTACTTT
GGTCCGGATG TGCCAGCAGA AGACTTGATT TGGCAGGACC CGGTACCCAA GGGTAACAGT
CAATATGACC CCGAGGCGGT TAAGGCACGC ATCGCCGGTA CGGGGCTTGG CGCCGCCGAG
CTGGTCGCCA CCGCATGGGA CAGCGCCAGA ACCTATAGAA ACTCAGATAA GCGCGGCGGA
GCCAACGGCG CACGCATCCG CTTGTTGCCG CAAAAAGACT GGGTAGCCAA CGAGCCCGCC
AGACTGGCCA GAGTGCTGGA GCTGCTTACC CCCATCGCCA GCGACATGGG CGTCAGCATT
GCCGACACCC TGGTGCTGGG TGGCAATCTT GGTGTCGAGC TGGCGGCCAA AGCCGCCGGT
TTCAATATCA AGGTGCCTTT TATCCCCGGT CGTGGTGATG CCAGTCAGGC ACAAACCGAC
ATCGACTCCT TTGAGGTGCT TGAGCCACTG GCCGATGGCT TCCGTAACTG GCAAAAGCAG
GACTTTGTGG TCACGCCGGA AGAAATGCTG CTCGACCGGG CACAACTCAT GGGACTCTCA
GCGCCGGAAA TGACAGTGCT GATTGGTGGC ATGCGCGCCA TGGCGGTTAA CCATGGTGGA
ACCACACATG GGGTGCTGAC CGACAATCCC GGCAGCCTCA GTAATGACTT TTTCGTTAAC
CTCACCGATA TGAGTTATCG CTGGAAACCG GTCGCCAACA ATCTCTATGA GATCTGCGAT
AGGGCAAGTG GCCAGAAAAA ATGGACCGCC ACCCGGGTCG ATTTGGTGTT TGGCTCCAAC
TCTGTATTGC GCGCCTACGC CGAGTACTAT GCCCAGGACG ACAACAAAGA GACCTTCGTA
AAGGACTTTG TCACCGCCTG GTGCAAGGTG ATGAATGCCG ACCGCTTCGA TGCCTAG
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| Protein sequence | MSNEGKCPVM HGGATSATQA DNHWWPKALN LDILHQHDSK TNPMAPGFNY REALKGLDVE
ALKQDLKALM TDSQAWWPAD WGHYGGLMIR MAWHSAGTYR IADGRGGGGH GAQRFAPLNS
WPDNGNLDKA RRLLWPIKQK YGNKVSWADL MILAGNMAYE SMGLKTFGFA FGREDIWHPE
KDTYWGAEKE WLAPSGGANS RYSGVRDLQN PLAAVMMGLI YVNPEGVDGN PDPLKTAQDM
RVTFARMAMN DEETVALTAG GHTVGKAHGN GNAANLGPEP EAAPLEEQGF GWMNHQSRGI
GRNTVTSGIE GAWTTHPTRW DNGYFHLLFS YDWALTKSPA GAWQWEPVNI REEDKPVDVE
DPNIRSNPMM TDADMALKMD PDYRRIAERF FHDPDYFADT FARAWFKLTH RDMGPKSRYF
GPDVPAEDLI WQDPVPKGNS QYDPEAVKAR IAGTGLGAAE LVATAWDSAR TYRNSDKRGG
ANGARIRLLP QKDWVANEPA RLARVLELLT PIASDMGVSI ADTLVLGGNL GVELAAKAAG
FNIKVPFIPG RGDASQAQTD IDSFEVLEPL ADGFRNWQKQ DFVVTPEEML LDRAQLMGLS
APEMTVLIGG MRAMAVNHGG TTHGVLTDNP GSLSNDFFVN LTDMSYRWKP VANNLYEICD
RASGQKKWTA TRVDLVFGSN SVLRAYAEYY AQDDNKETFV KDFVTAWCKV MNADRFDA
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