| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3266 |
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| Symbol | |
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| ID | 4605513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3877655 |
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| End bp | 3879667 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639782686 |
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| Product | ATP-dependent DNA helicase Rep |
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| Protein accession | YP_929138 |
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| Protein GI | 119776398 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01074] ATP-dependent DNA helicase Rep |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGA ATCCCGCGCA AAATGATGCA GTCCATTATG TTTCCGGCCC CTGTCTGGTG
CTGGCGGGTG CGGGCAGCGG TAAAACGCGG GTGATCATCA ACAAAATTGC CTATCTGGTG
CAGAAGTGCG GCTATCAGGC TCGCAATATT GCCGCCGTGA CCTTCACCAA CAAGGCGGCG
CGGGAGATGA AAGAGCGGGT AGCCCAATCC ATGGGCCGCA AAGAGGCGCG GGGGCTGTGG
ATTTCTACCT TCCACACTCT GGGGCTGGAA ATTCTCAAGC GTGAACACAA GGCTGTAGGG
CTGAAGGCCG GGTTTTCGCT GTTTGATGAT CAGGACACCC TGGCGCTTTT AAAGGAACTG
ACCGAAAAAG AGCTTCAGGA AGACAAGGAT CTGCTCAAGC TGCTGGCGAC CTCAATTTCC
AACTGGAAGG GGGCGCTGGT GATCCCGGAT CATGCTCGCA AGATAGCCAA AGATGAGCGG
GAGCAGTTGT TTGCGCTCCT GTACCAGCGT TATGCCCAGC ACATGAAGGC ATACAATGCC
CTCGATTTTG ATGACCTTAT TCTGCTGCCG ACATTGCTGC TGAGGCATAA CGAAGAAGTG
CGCAGGCGCT GGCAGACCCG TATTCAGTAC CTGCTGGTGG ACGAATATCA AGACACCAAC
GGCAGTCAGT ATGAGCTGGT AAAACTGTTG GTGGGCGAAC GTGCCCGGTT TACTGTGGTG
GGGGACGACG ACCAGTCAAT CTATTCCTGG CGCGGTGCCA AGCCCCAAAA CCTGGTGCTC
CTTGGCAAGG ATTTTCCGAG CCTTAAGCTT ATCAAGCTGG AGCAGAACTA CCGCTCCAGT
CAGCGCATTT TGCGCGCGGC CAACATCCTT ATTGCCAACA ATCCCCATGT CTACGACAAG
TCACTGTTTT CTGAGCTTGC CTACGGCGAG CCGATGCGGG TTATCACGGC GCTGAATGAA
GAGCAGGAAG CTGAGCGGGT GGTGGCTGAA ATTATTCGCC ATCGCTTCGT AGGGAAAACC
AGTTATGGCG ACTACGCCAT TCTCTATCGC GGCAACCATC AATCGCGTCT GATAGAGAGA
GCGCTGATGA CCAACCGCAT TCCCTACAAA CTCAGTGGTG GCACGTCCTT TTTTGCCCGT
TCTGAAATCA AGGACATCAT GGCCTATCTG CGGCTGGTGG TGAATCCAGA TGATGACAAT
GCGTTTTTAC GGATAGTCAA CCTGCCCAAA CGCGGCATCG GCCCGGCAAC TCTGGAGCGC
TTGGGTAACT TTGCCAACAG CAAACATATT TCCATGTTTG CGGCTATTTT TGAGCCTGAG
CTGGAGCTCC ATCTGGGTAA CAGTGCCCTG TCGGCGCTGG AGCAATTTGG CCGCTTTATC
GTTGAAACCG GAGACATTGC TGAGCGCGGT GAAGGCGTGG ATGCGATCAA GCAGCTCATC
CGCAACATCA ATTACGAGGA CTTCCTCTAC GAGACCAGCC CCAGCGCCAA AGCGGCAGAA
ATGCGGATGA AGAATATCTC CGAGCTGTAT CGCTGGGTCA CTGAGATGCT CAATGGGGAC
GATCTGGACG AGCCAATGAC GCTGCCGGAG GTGGTGGGCC GTTTGACCCT CAGAGACATG
ATGGAGCGTA ACAGCGAAGA CGAAGCCGGC GATCAGGTAC AGTTGATGAC CCTCCATGCC
TCTAAAGGAT TGGAGTTTCC CTACGTGTTT ATGATTGGCA TGGAAGAGCG TATTCTGCCG
CACCAGACCA GCATAGATGA AGACAACGTG GAAGAGGAAC GGCGGCTTGC CTATGTGGGG
GTGACCCGTG CGCAGCGGGA GCTTTGGTTT ACCCTGTGCC GTGAGCGGCG TCAGTTCGGC
GAAACCATGC GCTGCGAGCC CAGCCGTTTT CTGGACGAGC TACCCCAGGA TGACTTGATT
TGGGAGAGTC GCAAGCAGCC CCAAACAGAG CAACAACGGC AGGAAACGGG CAAAGCCAAT
ATCGCCAATA TCAGGGCCAT GTTTAAAAAA TAA
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| Protein sequence | MKLNPAQNDA VHYVSGPCLV LAGAGSGKTR VIINKIAYLV QKCGYQARNI AAVTFTNKAA
REMKERVAQS MGRKEARGLW ISTFHTLGLE ILKREHKAVG LKAGFSLFDD QDTLALLKEL
TEKELQEDKD LLKLLATSIS NWKGALVIPD HARKIAKDER EQLFALLYQR YAQHMKAYNA
LDFDDLILLP TLLLRHNEEV RRRWQTRIQY LLVDEYQDTN GSQYELVKLL VGERARFTVV
GDDDQSIYSW RGAKPQNLVL LGKDFPSLKL IKLEQNYRSS QRILRAANIL IANNPHVYDK
SLFSELAYGE PMRVITALNE EQEAERVVAE IIRHRFVGKT SYGDYAILYR GNHQSRLIER
ALMTNRIPYK LSGGTSFFAR SEIKDIMAYL RLVVNPDDDN AFLRIVNLPK RGIGPATLER
LGNFANSKHI SMFAAIFEPE LELHLGNSAL SALEQFGRFI VETGDIAERG EGVDAIKQLI
RNINYEDFLY ETSPSAKAAE MRMKNISELY RWVTEMLNGD DLDEPMTLPE VVGRLTLRDM
MERNSEDEAG DQVQLMTLHA SKGLEFPYVF MIGMEERILP HQTSIDEDNV EEERRLAYVG
VTRAQRELWF TLCRERRQFG ETMRCEPSRF LDELPQDDLI WESRKQPQTE QQRQETGKAN
IANIRAMFKK
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