| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3257 |
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| Symbol | |
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| ID | 4605504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3851736 |
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| End bp | 3852902 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639782673 |
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| Product | HemY protein |
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| Protein accession | YP_929129 |
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| Protein GI | 119776389 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG3071] Uncharacterized enzyme of heme biosynthesis |
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| TIGRFAM ID | [TIGR00540] hemY protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.306147 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATAAAAA CGCTCATTTA TCTTGGCATT ATTCTGATTG GGCTCTGCTT GAGCCCCTAC
ATTGTTGGCA ACACCGGCTA TCTGTATTTG TCAGCCTGGG GCTACGAAAT TGAAACCAGT
CTGGTGTTTG CCATTGTCGT GCTGGTGATT GCCTACGGCG TTATCGTGAT TGCCGAATGG
ATAGCCGTTA AAAGCATCAG CTTGGTGCTG GGCAGCCGTT ATCTGCCCGA ACGCTGGCGA
CGCAATGCCG CCAAACGCCA TACCCTGAAC GGAGCACTGG CGCTTGCTGA AGAAAACTGG
CCCGATGCTG AGCGCTTTAT GGCCAAGGGA GCCGCCAAAG GTGAGCTGCC AGCACTGAAT
CTGCTCGCTG CAGCGAGGGC GGCTCAGCAT CAGGGAAAAT ATGCCGAGCG TGATGACTAT
CTTGAAAAAG CTGTAACAGA GCCGAATGCG GCGACGGCCG TATTTACAAC CCGCACCCGC
TATCTGCTTA AACAGGGCCA ATTGGAGCGT GCCAGAACTG CACTCAATCA TTTGGCGCCG
ACCAGCAAAA GCAGCGCTGC GGTGATCAAA CTTGCCATGG AAGTCTATCT TGCCCAGCAG
GATTGGCGGG CAGTGAGAGA ATTGTTACCT GCCATCAAGA AGCACGCACT GCTTAATGAT
GCCAATTTTG AAGATTTATC TGTCAGAGTA AGCGTGAAGC TGCTGGAGCA GGCTGGCAGC
AAAGATTGGG ACAGTCTGGA TAAAGAATGG CAGTGGCTAT CCCGCAGCGA AAAACAGCTC
AGTGCCAATC GTGCTGCCTA TGCACTTGGG CTTGCCAAAC AAGGTAAAAA GGCCGAAGCC
GTTAAACTGC TTCTTAAAGA TCTGGAATCT TTGCCCGATC CTCAAGTTCT GGCGCTGCTT
CCCCAAGTCC TAAATGGTCA GGATGAGGCT CCAAGGCAAC AGTTGCTCAA GCTGGCACCC
AGGTTCGAGG ATGTGCATGA ATATCACGAA TGTGTGGCAC GACTTTGCCA GCAAGCCAGG
GAGTTTAAGA CTGCCTACGA GCATTGGCGT AAAGCCTGTG AGTTAAATCC ATCCAAAGAA
AATTGGTTGG CACTCGCCGA GCTCGACGAG CAACTGGGCA ATACCGACCT GGCGTTACAA
CATTACCGGA GGGCTGCCAA AGCCTGA
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| Protein sequence | MIKTLIYLGI ILIGLCLSPY IVGNTGYLYL SAWGYEIETS LVFAIVVLVI AYGVIVIAEW
IAVKSISLVL GSRYLPERWR RNAAKRHTLN GALALAEENW PDAERFMAKG AAKGELPALN
LLAAARAAQH QGKYAERDDY LEKAVTEPNA ATAVFTTRTR YLLKQGQLER ARTALNHLAP
TSKSSAAVIK LAMEVYLAQQ DWRAVRELLP AIKKHALLND ANFEDLSVRV SVKLLEQAGS
KDWDSLDKEW QWLSRSEKQL SANRAAYALG LAKQGKKAEA VKLLLKDLES LPDPQVLALL
PQVLNGQDEA PRQQLLKLAP RFEDVHEYHE CVARLCQQAR EFKTAYEHWR KACELNPSKE
NWLALAELDE QLGNTDLALQ HYRRAAKA
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