| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3255 |
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| Symbol | |
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| ID | 4605502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3849772 |
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| End bp | 3850491 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639782671 |
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| Product | uroporphyrinogen-III synthase |
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| Protein accession | YP_929127 |
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| Protein GI | 119776387 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1587] Uroporphyrinogen-III synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.286341 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGC TGCTCACCCG TCCTGAGGGC AAAAACGCCG CCATGGCCAG TGCACTGGAT
GCGCTGGCCA TTCCTTATTT GGTGGAACCC TTGTTATCGG TGGAGGCAGC AGCCGTCACT
CAAGCGCAGT TGGATGAACT TTCACGCGCC GACATACTCA TCTTTATCAG TACCAGTGCG
GTCAGTTTTG CCACCCCCTG GCTGAAGGAC CAATGGCCAA AAGCCACCTA TTACGCGGTG
GGAGATGCCA CTGCCGATGC CCTGGCTTTG CAAGGTATCA CAGCCGAACG CTCACCCGCC
GACAGCCAGG CCACAGAAGG TTTACTCACA CTCCCCTCTC TGGAACAGGT GTCCGGTAAA
CAGATAGTCA TAGTCCGGGG TAAAGGTGGC CGCGAAGCCA TGGCCGATGG TTTGCGGCTT
CGAGGGGCAA ATGTGAGCTA TCTTGAGGTC TATCAGCGGG CCTGTCCGCC GCTGGATGCC
CCTGCAAGTG TCAGTCGCTG GCAATCCTTC GGTATAGACA CCATAGTAGT GACCAGTGGT
GAAGTACTGG AAAACTTAAT AAATCTGGTT CCCAAAGACA GTTTTGCATG GCTCAGAGAC
TGTCATATCA TAGTCCCCAG TGCCCGGGTC GAAACCCAGG CAAGGAAAAA GGGACTTCGT
CGAGTCACCA ACGCCGGAGC AGCAAACCAA GCCGCCGTAC TGGACGCATT GGGCATGTAA
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| Protein sequence | MKLLLTRPEG KNAAMASALD ALAIPYLVEP LLSVEAAAVT QAQLDELSRA DILIFISTSA
VSFATPWLKD QWPKATYYAV GDATADALAL QGITAERSPA DSQATEGLLT LPSLEQVSGK
QIVIVRGKGG REAMADGLRL RGANVSYLEV YQRACPPLDA PASVSRWQSF GIDTIVVTSG
EVLENLINLV PKDSFAWLRD CHIIVPSARV ETQARKKGLR RVTNAGAANQ AAVLDALGM
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