Gene Sama_3248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3248 
Symbol 
ID4605495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3842825 
End bp3843460 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content52% 
IMG OID639782664 
Producthypothetical protein 
Protein accessionYP_929120 
Protein GI119776380 
COG category[S] Function unknown 
COG ID[COG3159] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGATC CAAAGCACAG GACGGAAGCG CCCTTTGATG AGCAGATAAT TCGCGAGTAT 
CTGATTGATA ACCCTGACTT TTTTGGTCGT TATCCAGAAC TCTTGCTGGC GATGCGCATG
TCTCACACCG AGCGGGGCAC AGTATCGCTG CTTGAGCGCC GTCAGGAAAT GTACCGAAAC
CGCGTGGCCC AGCTTGAAGA AGAAATTACT GCCCTGATGA CTCAGGCCCG CAGAAACGAA
AAAATATTTC GCTTTAACAA CGATTTGCAA TTCAAGCTGC TGGAGAGTGA AGACCTGGGC
GATGTAAGGC AGATTCTGTC TCAGGCATTG ATGAGCGAGT TTGGCTTTAC CCACGTCAGG
CTTATCACTG TGCACGATGT GGACAGTGAA CTGTCTGCCA TCTGGAGTAA CCGTCTCGCC
CGCGGTCATT ACTTCGGCCG TCTTACCGCC AGTGAATCGC GGCGTTTATT TGGTTCTGAA
GTGGGCTCAG TGGCACTGAC ACGTTTATCC GAACATTGTG GTCAGGTGGT ATTTGCCATC
GCCAGTCAGG ACCCGGCGCA TTTTCATCCC GAGATGGACA ACTTGCTGTT GGATCAACTA
CGGCGGATTT TGGACCATCT GCTGCCAAGG CTCTGA
 
Protein sequence
MTDPKHRTEA PFDEQIIREY LIDNPDFFGR YPELLLAMRM SHTERGTVSL LERRQEMYRN 
RVAQLEEEIT ALMTQARRNE KIFRFNNDLQ FKLLESEDLG DVRQILSQAL MSEFGFTHVR
LITVHDVDSE LSAIWSNRLA RGHYFGRLTA SESRRLFGSE VGSVALTRLS EHCGQVVFAI
ASQDPAHFHP EMDNLLLDQL RRILDHLLPR L