Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3248 |
Symbol | |
ID | 4605495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3842825 |
End bp | 3843460 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639782664 |
Product | hypothetical protein |
Protein accession | YP_929120 |
Protein GI | 119776380 |
COG category | [S] Function unknown |
COG ID | [COG3159] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGATC CAAAGCACAG GACGGAAGCG CCCTTTGATG AGCAGATAAT TCGCGAGTAT CTGATTGATA ACCCTGACTT TTTTGGTCGT TATCCAGAAC TCTTGCTGGC GATGCGCATG TCTCACACCG AGCGGGGCAC AGTATCGCTG CTTGAGCGCC GTCAGGAAAT GTACCGAAAC CGCGTGGCCC AGCTTGAAGA AGAAATTACT GCCCTGATGA CTCAGGCCCG CAGAAACGAA AAAATATTTC GCTTTAACAA CGATTTGCAA TTCAAGCTGC TGGAGAGTGA AGACCTGGGC GATGTAAGGC AGATTCTGTC TCAGGCATTG ATGAGCGAGT TTGGCTTTAC CCACGTCAGG CTTATCACTG TGCACGATGT GGACAGTGAA CTGTCTGCCA TCTGGAGTAA CCGTCTCGCC CGCGGTCATT ACTTCGGCCG TCTTACCGCC AGTGAATCGC GGCGTTTATT TGGTTCTGAA GTGGGCTCAG TGGCACTGAC ACGTTTATCC GAACATTGTG GTCAGGTGGT ATTTGCCATC GCCAGTCAGG ACCCGGCGCA TTTTCATCCC GAGATGGACA ACTTGCTGTT GGATCAACTA CGGCGGATTT TGGACCATCT GCTGCCAAGG CTCTGA
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Protein sequence | MTDPKHRTEA PFDEQIIREY LIDNPDFFGR YPELLLAMRM SHTERGTVSL LERRQEMYRN RVAQLEEEIT ALMTQARRNE KIFRFNNDLQ FKLLESEDLG DVRQILSQAL MSEFGFTHVR LITVHDVDSE LSAIWSNRLA RGHYFGRLTA SESRRLFGSE VGSVALTRLS EHCGQVVFAI ASQDPAHFHP EMDNLLLDQL RRILDHLLPR L
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