| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3247 |
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| Symbol | |
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| ID | 4605494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3841932 |
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| End bp | 3842822 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639782663 |
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| Product | integrase/recombinase XerC |
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| Protein accession | YP_929119 |
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| Protein GI | 119776379 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4973] Site-specific recombinase XerC |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACC AAGCCAGCTG GCTGGAACGT TTTACCCGCT ACCTTGCCAC CGAGCGACAA
TTATCGCCCA TGACAGTGCG TAATTATCGC TTTGAGCTGG AACGCGCCGA TACGCTACTG
GGACAGCGAA GCTGGCAGCA GTTGAGTCGC CAGGACCTCA GCGGTCTGAT GGCCCGGCTG
CATCGCCAGG GGCTGTCGCC GCGATCTCTT TCGCTTACCG CGTCGGCACT CAAGCAGTTT
GGTCAGTTTC TGTTAAAAGA GGGGCTGATA GACACCAACC CTGCGGCCAC CCTCAGTGCA
CCGAAGCAGT CCAAAACCTT GCCGAAAAAC CTTGACCCTG ATTCGGTCAA TCACCTGCTG
GATATTCCTC CGGAAGATGG CCTGGCACTG CGTGACAAAG CCATTATGGA GCTCTTTTAC
TCCTGTGGCC TGCGTCTGGC CGAACTGGCG GCGCTGGATG TGAAAGACCT TGATCGCGAG
AGCCGGGAGG TGAGGGTTAT TGGTAAAGGC AGCAAGGAGC GGATCCTGCC TGTGGGCAGT
GTCGCGTTGG CGGCCATTGG CGATTGGCTG AAGGTCAGGA ATCAAATGCC TTGCCAGGAC
GATGCCTTGT TTGTGTCTAG CCGTGGCAGC AGGCTTTCCC ATCGCAGTAT TCAGGCGAGA
ATGGAGAAAT GGGCGCAAAT ACAGGGGCTC AGCGTTGGAG TGCACCCTCA CAAACTCAGG
CATTCCTTCG CGACGCACAT GCTGGAGTCC AGTGGCGACT TGCGGGCTGT TCAGGAATTG
TTGGGTCACG CCAATCTTGC CACCACACAA ATTTACACCA GTCTCGACTT TCAGCATCTG
GCCAAGGTGT ATGATGGCGC CCACCCTAGA GCGCGCAAAA AGGGGGATTG A
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| Protein sequence | MADQASWLER FTRYLATERQ LSPMTVRNYR FELERADTLL GQRSWQQLSR QDLSGLMARL
HRQGLSPRSL SLTASALKQF GQFLLKEGLI DTNPAATLSA PKQSKTLPKN LDPDSVNHLL
DIPPEDGLAL RDKAIMELFY SCGLRLAELA ALDVKDLDRE SREVRVIGKG SKERILPVGS
VALAAIGDWL KVRNQMPCQD DALFVSSRGS RLSHRSIQAR MEKWAQIQGL SVGVHPHKLR
HSFATHMLES SGDLRAVQEL LGHANLATTQ IYTSLDFQHL AKVYDGAHPR ARKKGD
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