| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3246 |
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| Symbol | |
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| ID | 4605493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3841216 |
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| End bp | 3841932 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639782662 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 1 family protein |
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| Protein accession | YP_929118 |
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| Protein GI | 119776378 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.99764 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATAT TTCGTCGCCT TAAGCCCATT GCCGCCATCA GTTTTGACCT GGACGACACC
CTGTACGACA ACCGCCCCGT GATTATGGCC GCGGAGCTGG CGCAGCTGAT GTACCTTGCG
CGCCATTATC CCGTGACCAA GGCCTGGGGG CGGGACGAAT GGCGCCATCA TAAGCTCAGG
GTATTGGCGC ATCATCCCGT GCTGGCACAC GACCCAACGG CACTGCGATT GCTGACTCTG
CATTCAGGTC TGCTTTATTT TGGTTTGTCC GAAGCGGACG CCACAACGGC TGCCGGCGCC
GTGATGGATG AATTTATCAG GGCCCGCAGC CACTTTCGGG TACCTGAAAG CTCGTTGCAG
CTGCTGGCAA AACTCGGGCA AAAATACCCA CTGATAGGCC TCACCAATGG CAATGTCGAC
CCGGAGCGTA TAGGTCTGGG AGACCGGCTG GTGTTTGTGC TTGCCGCGGG CAGTGGTGTA
AGGATGAAAC CTGTGGACGA TTTGTTCCGG ATGGGATGCA ATCGCCTTGG CATAGCGTCT
GAGCAGTTGC TCCATGTGGG GGACAGCCAC AGCGCCGATG TGGTGGGCGC ACTCAAGGCC
GGGTGTCAGG CCGTGCTGCT CAATCCTGCC CATGGAGGAG TCGAACCAGG CCCACTGGCA
TCGCCATTGC CTCACCTGCA AATTCAGCGA CTGGATGCCT TGCTGGCACT GCTGTAA
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| Protein sequence | MQIFRRLKPI AAISFDLDDT LYDNRPVIMA AELAQLMYLA RHYPVTKAWG RDEWRHHKLR
VLAHHPVLAH DPTALRLLTL HSGLLYFGLS EADATTAAGA VMDEFIRARS HFRVPESSLQ
LLAKLGQKYP LIGLTNGNVD PERIGLGDRL VFVLAAGSGV RMKPVDDLFR MGCNRLGIAS
EQLLHVGDSH SADVVGALKA GCQAVLLNPA HGGVEPGPLA SPLPHLQIQR LDALLALL
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