| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3244 |
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| Symbol | |
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| ID | 4605491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3840011 |
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| End bp | 3840502 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639782660 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_929116 |
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| Protein GI | 119776376 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.978613 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAT TTGCCCTCGA TGATATTCAG CATCTGCGCG AGTCGGTACA GGTGGAGTTT
AAACTCGCTG CCGGCCGCGA TGGCCAGGGA CAGCTGCCTG AAGGCATGTG GGAAAGCTAT
AGCGCCTTCG CCAACACCCT CGGCGGCGAG ATCATTTTGG GGGTGCGGGA GTCTCAGGGC
GACTTCTCTA TCGAGGGCAT AGCCAATCCA CTGCCCATGC TGGAAGACAT CTGGCGCATT
CTAAAAGACC CGCGCCGGGT GTCCTGCAAT GTACTGTCCC CCACCGACGT TCAAATTATT
GAACTTGCAG GTAAAAAACT GATTCGTCTT CATGTGCCCG AGGCCTCCGT CCATCAAAAG
CCGGTTTTCC TCGGACCGGA TCCCTACACA GGCACCTTCT TTAGGGTGGA TTCGTCGGAT
ATGCGCGCCA GCCGGCGTCA GGTCAGCCAG TTGCTGAAAA AGCAGCGCCG ACTGTGCCCG
CCGGAACAAT AG
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| Protein sequence | MTQFALDDIQ HLRESVQVEF KLAAGRDGQG QLPEGMWESY SAFANTLGGE IILGVRESQG
DFSIEGIANP LPMLEDIWRI LKDPRRVSCN VLSPTDVQII ELAGKKLIRL HVPEASVHQK
PVFLGPDPYT GTFFRVDSSD MRASRRQVSQ LLKKQRRLCP PEQ
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