| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3242 |
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| Symbol | |
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| ID | 4605489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3836310 |
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| End bp | 3838673 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639782658 |
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| Product | phosphoglycerate transport regulator |
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| Protein accession | YP_929114 |
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| Protein GI | 119776374 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4192] Signal transduction histidine kinase regulating phosphoglycerate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.7219 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAGT CTCACTCACC CCTTGGCAGA AGGCTCTTTA TTGCCTTTTC GGCCATGTTG
GGGCTGACAC TGTTGGTCGG CCTGACCAGC CTGCTGATGT GGGACCGACT GAGTGCCCGG
GTCAGCAGCA TCATCAGTGA AAGCGTGCCC ACCATCAATG CTACCTACAC ACTGGAACGT
GCCAGCAACA GGCTGTTGCA GCTTTTGGGA CAACTGCCCG GCGCCGAGGA TGAAATCACC
CTGCTGACCA TGGAGCGGCA GGTATCCGAA GCCATGGGTG AACTCGAAAA TGCCTATCTG
GTCAACCTGC ACAGCGACGA TGAGCGGGCA CTGCAACAGG CCCGCTTCGG TGAGCTTGAA
GCATTAATCC ACAACCAGAG TCAGCTCCTG CGACACCAAC TCACCCTGGC GCAGCATCTT
TCGTCGCAGC AAAAGCAGCT GGCGCGACTG CATCAGGATT TAACGGATGA AATGACGCCG
CTGCTGCAGG AAGTGGCCTG GCACTTAAGC GCCCAGCTTG GCAACCGCAC CTCGGCCACT
ACCATCACTT CTGTGCTGCA GGAATTTTCG GTGCTGCAAA ATATCGCCTT GAAAGAAAAC
GAGATTCATC AGCTCAGCAC CGAGATTATC AACCAGCGCC ATCAAAGGGA GCTGGAGCAT
GCCTTCTCGT TTATTGGTTT TCAAATCGAC GAGTTGAAGC TGCTCACCAC TCAGCTTGCC
GCCTACCCAT CGACTGTGAG CCATCGCCAG ATATTGCAGG AACTGGTGGA TCTGGTGAAA
CCCGGTGGAG CCCTGCATCA ACTGCTCGGC GAAGACGTGG GAAACCAACT TAAAATCAAA
TCATTGCAAC CAAAGATCAA TGAGCTTATT CAGCCCTATC ATGCCCAGGT GGTGACCGCC
GTCGCTCAAG CCAACACCAA CCTGGAGTCA TTGGTGCAAG CCACCAACCG CCAGGTAAGC
CAGGGCAAAG CCTGGCTGCT GCTTATCCTC ACAGGGGCAC TGATCTTAAG CACCTTTGTG
CTGACCGGCC TGATTTCACG GCGCCTGATT GGCCGCCTGA ATCTGCTTAG CGAGGATTTG
GCAAAGGTGT GCAGCAACGA CCTGTCGAGC CCTCTTAGCG TGCGTGGTAG AGATGAAATT
GGCCGCCTCG GCGAGCAGTT GCTGCAGTTT CGCGCCCAGC GGCAACTGAT GGACAAAACC
AATGCACTCA ACCTGATTAA CAACACCCAG GCCTGCCTTA TCACCTGTCT GATGGACGGC
ACCATAGAAT CGGTCAACCC CACTGCGAGA AAGTTGTTAC CCCTTGGAAC TGAACCTGAG
CAATCGCTGC TGTGGCAGGC CTTTCCCCCT GCGGCGGCTC AGCAGCTGGC AGACCAGTTT
GCCCCCGGCA GTACCTTACA AGGGCTCGGT CAAAGCCATT GTCTGCTGGA GCTGGGCGAC
GATGATCGGC GGGCCTTCTG GCACTTCGAT TTTCGCCGCT ATGAGCAAGC GGGGGAGTTT
AAGACCATTA TCACCATCAC AGACATGACC CGTCAGGAGC TGAATGCCCG CGAGCTGTCG
GAGCGGGTTG CCGAACGAAC CCGGGATCTT AAGGAAAAAA ATCAGCAGCT TGAGCAAGAA
GTAGAGCGTC GCACCCAGGC GCAGAACGAC CTGTTGCGCG CCCAGGATGA ACTCATTCAG
GCCGCCAAGA TGGCGGTGCT GGGCCAGGCC ATGACCAGTA TGGCCCATGA GTTGAACCAG
CCACTGTCGG CTATTTCCAC CTTCCTCTAC ACCAGCCGTA TGGCCGCCGA ACAAGGCGAT
ACAGCCCTGC TTACCGACAA TCTGGAACGT ATAGGTCAGC TGAGTAAACG GATGCACCGC
ATCGTGGGCG CCTTGAAAGA ATTTGCCCGC AAGAGCCCGC AAACCCGGGT CAGGGAAGCC
GTTTCACTGG GCACCATAGC CGATAATGCC CTGCTGCTGC TCGCCCCCCG GATAAAACGC
GAGAATGTGC AGGTAGAAAG CCACCTCGAC AGCAGCCTCT GTGTTATCGG CGACCCGGTT
GAGATAGAAC AGGTGCTGAT CAATCTGTTG GTCAATGCGC TCGATGCCAT TGCAAGCTGC
GAGCAAAAGC ACATCCTTAT AGAACAGTTC CCACAACCCG GCAGCACCCT TTTAGCCATT
CGCGACAACG GCCACGGTTT TCCCGATGCT GTGTTGCAAA AGCTGTTTTC GCCTTTTGTT
ACCACCAAAG AAGTGGGGCT GGGCCTCGGA CTTTCGATTT GCCGAACCCT GATGGAACGC
CAGGAAGGCG ATATCCGCCT TGCCTGCGCT ATGGACGGCA ACACCCTGAT GCTGTTGGAG
TTTACAAATG TCCCATCTGC TTAA
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| Protein sequence | MSKSHSPLGR RLFIAFSAML GLTLLVGLTS LLMWDRLSAR VSSIISESVP TINATYTLER
ASNRLLQLLG QLPGAEDEIT LLTMERQVSE AMGELENAYL VNLHSDDERA LQQARFGELE
ALIHNQSQLL RHQLTLAQHL SSQQKQLARL HQDLTDEMTP LLQEVAWHLS AQLGNRTSAT
TITSVLQEFS VLQNIALKEN EIHQLSTEII NQRHQRELEH AFSFIGFQID ELKLLTTQLA
AYPSTVSHRQ ILQELVDLVK PGGALHQLLG EDVGNQLKIK SLQPKINELI QPYHAQVVTA
VAQANTNLES LVQATNRQVS QGKAWLLLIL TGALILSTFV LTGLISRRLI GRLNLLSEDL
AKVCSNDLSS PLSVRGRDEI GRLGEQLLQF RAQRQLMDKT NALNLINNTQ ACLITCLMDG
TIESVNPTAR KLLPLGTEPE QSLLWQAFPP AAAQQLADQF APGSTLQGLG QSHCLLELGD
DDRRAFWHFD FRRYEQAGEF KTIITITDMT RQELNARELS ERVAERTRDL KEKNQQLEQE
VERRTQAQND LLRAQDELIQ AAKMAVLGQA MTSMAHELNQ PLSAISTFLY TSRMAAEQGD
TALLTDNLER IGQLSKRMHR IVGALKEFAR KSPQTRVREA VSLGTIADNA LLLLAPRIKR
ENVQVESHLD SSLCVIGDPV EIEQVLINLL VNALDAIASC EQKHILIEQF PQPGSTLLAI
RDNGHGFPDA VLQKLFSPFV TTKEVGLGLG LSICRTLMER QEGDIRLACA MDGNTLMLLE
FTNVPSA
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