Gene Sama_3222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3222 
Symbol 
ID4605469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3815047 
End bp3815778 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content57% 
IMG OID639782638 
Productfumarate reductase cytochrome b-556 subunit 
Protein accessionYP_929094 
Protein GI119776354 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCG CACGCACACT GACAGAACAT ACATTAAATC CACGCACGGC AGGGCATCCC 
TGGTCGGCGC GTGCAGACAG GTTGCAGAGC CTCACGGGAC TCATGCTGGG GGGCTTTTTG
CTGCTGCATA TGCACTTTGA GTCGAGCATT CTGCTGGGCA AAGAGGTGTT TTATCAGGTG
GTGCAGCTGC TTGAAGGGGG CATGTTCTCA AGCACCGGCC ACGGCTTTCC CTGGGTGACC
AAGGCGTTCT CTGTGCTGGT ACTGGTTGTG GTGTGCCTGC ACGCGGCACT GGCGCTGCGC
CGTTTCCCCA CTCAGCTTGG TCAGTGGCGC CTGCTGCGCT CCCATCTGGG CTCCATCGCC
CACAAGGATA CCCATGCCTG GTTTTGGCAG CTCATCACAG GTTTTGTGCT GTTTTTCCTG
GTGCCGGTTC ACTTATTTAC CATGATTCTT AACCCCGAGA TTGGCCCGCA TCTGTCGGCG
GAGCGGGTGT TTCATAACAA TGCCTGGGTG CTCTATGCCC TGTTGCTGCC AGCGGTGGTG
GTGCACGCCA TGATTGGACT CTACCGGGTA TCGGTGAAGT GGGGCTGGGT GGTGCACCGC
AAGCCGCTTC GCAAGGTGGT CAAGCTGCTT ATCGTCTATC TTTTGTGCTT GGGCACATCG
AGCCTGGTGG CTTATATGTT TATCGGCAGT AGCCTGACAT TGCCGGTAAC GCCGTTTTCA
CCGGCGGGTT AA
 
Protein sequence
MNSARTLTEH TLNPRTAGHP WSARADRLQS LTGLMLGGFL LLHMHFESSI LLGKEVFYQV 
VQLLEGGMFS STGHGFPWVT KAFSVLVLVV VCLHAALALR RFPTQLGQWR LLRSHLGSIA
HKDTHAWFWQ LITGFVLFFL VPVHLFTMIL NPEIGPHLSA ERVFHNNAWV LYALLLPAVV
VHAMIGLYRV SVKWGWVVHR KPLRKVVKLL IVYLLCLGTS SLVAYMFIGS SLTLPVTPFS
PAG